Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12-
23] 61 sequences; 27,876,544 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq28 208 9e-49
seq24 116 4e-21
seq29 107 2e-18
seq16 84.2 3e-11
>seq28
Length=749551
Score = 208 bits (230), Expect = 9e-49
Identities = 562/849 (66%), Gaps = 13/849 (2%)
Strand=Plus/Minus
Query 114470 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 114529
||||| || |||| || || || | | ||| ||| | | |||||| || || ||
Sbjct 4270 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCG 4211
Query 114530 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 114589
|| |||||||| || ||| || ||||| | ||||||||| || || || ||||
Sbjct 4210 GTGCACAAATTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCG 4151
Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649
|| |||||||| |||||| | || | || || || |||| || |||||| || | |
Sbjct 4150 GCGTCCTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTAC 4091
Query 114650 CAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 114708
|| | | | ||| | || | || ||||| || ||||||| ||||| || | |
Sbjct 4090 CAAAGCTTTTGCG-CGGGGATCGTCTTCTTGGCGCGACCCTCCTTTTCGTATTTCTCGAA 4032
Query 114709 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 114768
| ||| | |||||||| || | | || ||| || || || | | ||||||||
Sbjct 4031 CAAGGCCTTGAACTCTTCGCCATAGACTTCGTGGAGACCGGGGGCTTCGGCGGGGCAGAA 3972
Query 114769 GAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGC 114828
||| | ||| | || | |||| ||||||| ||||||||| || || |||||||| ||
Sbjct 3971 GAGGGGCCAGTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGC 3912
Query 114829 TGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 114888
| |||||||| ||| ||| |||| || | || || || || | |||| ||
Sbjct 3911 CAAAAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAA 3852
Query 114889 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACG 114945
|| | || || ||||||||||| || ||||| | ||||| | || |||
Sbjct 3851 CTCGAAGACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTT 3792
Query 114946 ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACC 115005
||| | |||| || || | ||| ||| ||| | || || ||||| || | ||| ||
Sbjct 3791 GCCACCTTGGTCGACGTAGCGCGCGGTGTTATTGTAGACACGGAGCATGGGGACGATGCC 3732
Query 115006 ATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATG 115063
| || | ||| || || || || || ||| | | || | || | ||||||
Sbjct 3731 GTTCGAGTAGCCGTTCGTGCCGGCAATGTAGGAGCC--GGTCGCGCGGATGTTGTGGATG 3674
Query 115064 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 115123
|| ||| ||||| || || ||| ||||| | |||||| | |||| || |||||
Sbjct 3673 CTCAAACCGATACCACCGGCGGTCTTGGAGATGAGAGCGCACGTCTTGAGCGTGTCGTAG 3614
Query 115124 ATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTT 115183
|| || |||||||| ||| |||| | | || | ||| || ||| | || ||
Sbjct 3613 ATGCCTTCGATCGAATCATCCTTCATCGTGACCAAGAAACACGACGAAAGCTGCGGGTGA 3554
Query 115184 GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACC-TTGGGACATCTT 115242
|| || || ||||||||||| || || | |||||| | || |||| | ||||||
Sbjct 3553 GGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGT-AAAGTACCGCTCGGACATGAG 3495
Query 115243 ATCGTAGGTCTCCAAGACG-GCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCA 115301
| ||| | || ||||||| || | ||||| | ||||||||| |||| | ||| ||||
Sbjct 3494 GTTGTACGACTGCAAGACGCGCTCG-ATGTCGTGCCCGTGAATGCCGACGGCGACACGCA 3436
Query 115302 TAAACATGT 115310
| | |||||
Sbjct 3435 TGAGCATGT 3427
>seq24
Length=1725410
Score = 116 bits (128), Expect = 4e-21
Identities = 292/433 (67%), Gaps = 17/433 (4%)
Strand=Plus/Minus
Query 172526 CCCTTGGAAGCCTTGATGATTGGTGTCACCA--TTGAGACCACAAACCC--CAACTTGAG 172581
||||||| ||||||| ||| || || | | | ||| | | || ||| || ||||||
Sbjct 581880 CCCTTGGTCGCCTTGACGATGGGGGTGATAAACTCGAG-CAAGAAGCCCTTCAGCTTGAG 581822
Query 172582 GAGGGATGGCCAGAAGTAGTGGATCATATTCAGGATGAGACCCTTAATGTGTGAACCATC 172641
| || || | |||| | || | || | ||| |||||||| || || || |||||
Sbjct 581821 CAACGAAGGGAACCAGTAATCGAGGAAGTTGATGATCAGACCCTTGATATGCGATCCATC 581762
Query 172642 GTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGATA 172701
|| ||| ||| | ||| ||||| ||| || || || ||| | || || ||
Sbjct 581761 GTGATCTTGATCGGCCATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTCGGTGTA 581702
Query 172702 CTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTTTGATGT 172761
| || ||||| || ||||||||||||| ||||| | ||||| ||| || | |||
Sbjct 581701 AACTTTGCCCTGCTGCAGACCCAAGATCTGCTTGATCGC-TTGAA-TCTCGGCAT--TGT 581646
Query 172762 -GAGTTGCGCCA---CTGAAGCATCGCGGACATTTTTACACTTCCCACGGAGAGGGAACA 172817
||| | || | | || || || || || |||| || || | |||||| |
Sbjct 581645 CGAGGAGGGCTTTGCCCGCCGCTTCACGCACGTTGAGCAACTTTCCTCGCAAAGGGAAGA 581586
Query 172818 CACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGGAAT 172877
|||| |||| || ||||| || |||| ||||| | || ||||| | ||| |||||||
Sbjct 581585 CACCATAGTTGTCTCGACCGACGACAGCCAGACCCGAGACGGCGAGCGCCTTGGCGGAAT 581526
Query 172878 CACCCTCCGTCACGATGAGCGTACACTTT--CCAGATTGTGCCGTCCCCGCCTTGTTCGC 172935
| || || |||| ||||||||| ||||| || | | | ||| || || ||||||||
Sbjct 581525 CTCCTTCGGTCAAGATGAGCGTGCACTTGGACCCGTTCCT--CGTACCAGCGTTGTTCGC 581468
Query 172936 ATCGTCCAACTTG 172948
||| || | ||||
Sbjct 581467 ATCTTCGAGCTTG 581455
>seq29
Length=1745553
Score = 107 bits (118), Expect = 2e-18
Identities = 204/298 (68%), Gaps = 2/298 (1%)
Strand=Plus/Plus
Query 8637 TGGCTCGTGAAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTC 8696
||| |||| || || ||||| || | || | | | | |||||| |||||| | |||
Sbjct 71356 TGGATCGTCAAAAACTACCGCGAGGCGTACGATATGTACGCGTGCAACGGTATCTTGTTC 71415
Query 8697 AACCACGAGTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACCGATGGTATC 8756
||||||||||| || |||||||| | || || |||| ||||||| || | | ||
Sbjct 71416 AACCACGAGTCCCCGCGTCGTGGTCGCACCTTTGTCACAAGGAAGATCTCCCGAGCTGTC 71475
Query 8757 AAACAAATCGTCGCG-GGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAG 8815
| ||| |||| ||| | ||| | | | | | || || | | ||| || |
Sbjct 71476 GCCGAGATC-TCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAATATGGAGGCCAAGCG 71534
Query 8816 GGACTGGGGACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAGA 8875
|| ||||||||||| ||||| || || | |||||| | || || ||||| |
Sbjct 71535 TGATTGGGGACACGCGTGCGACTACGTCGAGGGTATGTGGAGGATGCTGCAGCAAGACAA 71594
Query 8876 GGCGGACGAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 8933
| | ||||| | |||| |||||||||| ||||| ||| |||||| ||||||||| |||
Sbjct 71595 GCCTGACGACTTTGTCCTCGCGACGGGTGAGACCCACCCCGTCAAGGAGTTCGTCGAG 71652
>seq16
Length=975364
Score = 84.2 bits (92), Expect = 3e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 8526 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCTCAAAATGAGGAG 8585
|| || || || |||||||| ||| || || || || ||||||| ||| |
Sbjct 316880 TACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTCCGAGACG 316821
Query 8586 ACACCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGTG 8645
|| |||||||| || || || ||| || ||| | ||| | || ||| ||||
Sbjct 316820 ACCCCCTTCTACCCTCGTTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTGGATCGTC 316761
Query 8646 AAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTCAACCACGAG 8705
||||| ||||| || || || | | | |||||| |||||| |||||||||||||||
Sbjct 316760 AAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCCTCTTCAACCACGAG 316701
Query 8706 TCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATC 8744
|| ||||| ||||||| ||||| || | ||||||
Sbjct 316700 TCCCCCCGCCGTGGCCGCACCTTCGTCACGAGAAAGATC 316662
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597353144517880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |