Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12-
23] 61 sequences; 27,876,544 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq47 107 2e-18
seq24 105 7e-18
seq10 91.5 1e-13
>seq47
Length=1359276
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | || | |||||| || || || ||||||||||| |||| ||||| | ||
Sbjct 821923 AGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCC 821864
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| ||| | ||||| || || ||||| || ||||| || || || |||
Sbjct 821863 TCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCT 821804
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || || | || || || || || || | || | |||
Sbjct 821803 TGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 821744
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||||||| || || ||||| ||||||||
Sbjct 821743 TTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821712
Score = 100 bits (110), Expect = 3e-16
Identities = 154/220 (70%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | || | |||||| || || || ||||||||||| |||| ||||| | ||
Sbjct 567688 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCC 567629
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| || | || | ||||||||||| || ||||| || || || ||
Sbjct 567628 TCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 567569
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || || | || || || || || || | || | |||
Sbjct 567568 TGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 567509
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTAATAA 64451
|||||||||| || || ||||| |||||||| | || ||
Sbjct 567508 TTGCCGGTCAGGGTCTTGACGAAGATTTGCATCTGAACAA 567469
Score = 98.7 bits (108), Expect = 1e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | || | |||||| || || || || |||||||| |||| ||||| | ||
Sbjct 568144 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCATCC 568085
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|||||||||||||| || | ||||| || || ||||| || ||||| || || || ||
Sbjct 568084 TCAAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCC 568025
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || || | || || || || || || | || | |||
Sbjct 568024 TGAATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 567965
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||||||| || || ||||| ||||||||
Sbjct 567964 TTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 567933
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | || | |||||| || || || ||||||||||| |||| ||||| | ||
Sbjct 821467 AGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGACCATCC 821408
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| || | ||||| || || ||||| || ||||| || || || ||
Sbjct 821407 TCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCC 821348
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || || || || | || || || || || || | || | |||
Sbjct 821347 TGGATCTTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 821288
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||||||| || || ||||| ||||||||
Sbjct 821287 TTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821256
Score = 89.7 bits (98), Expect = 5e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | || | |||||| || || || |||||||| || |||| ||||| | ||
Sbjct 822151 AGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCC 822092
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| ||| | || | ||||| ||||| || ||||| || || || ||
Sbjct 822091 TCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCC 822032
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || || || || | || || || || || || | || | |||
Sbjct 822031 TGGATCTTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 821972
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||||||| || || ||||| ||||||||
Sbjct 821971 TTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821940
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | || | |||||| || || || || ||||| || |||| ||||| | ||
Sbjct 821695 AGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGCGAGCGTGCGGCCATCC 821636
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| ||| | || | ||||| ||||| || ||||| || || || ||
Sbjct 821635 TCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCC 821576
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || || || || | || || || || || || | || | |||
Sbjct 821575 TGGATCTTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 821516
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||||||| || || ||||| ||||||||
Sbjct 821515 TTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821484
>seq24
Length=1725410
Score = 105 bits (116), Expect = 7e-18
Identities = 163/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | ||||| | || | ||||| || ||||||||||||||||| ||
Sbjct 1413370 ACCACCACGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAATCGGC 1413429
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| ||||| | || || |||||||||||||| | ||||| || |||||||| || ||
Sbjct 1413430 GAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGG 1413489
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| ||||| || ||||| || || ||| || || | || || | || ||
Sbjct 1413490 GATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGAC 1413549
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTAA 64448
|| | || | ||||||||| || | || || || || ||||||| | |||
Sbjct 1413550 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCACTGTAA 1413602
>seq10
Length=1963216
Score = 91.5 bits (100), Expect = 1e-13
Identities = 88/113 (78%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| || ||||| |||||||| || || | |||||| | || || ||||||||||||
Sbjct 1805592 GTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCGAGCTGCTTGCCG 1805651
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359
|| | ||||| || |||||||| || || || ||||| || ||||| || ||
Sbjct 1805652 GCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTT 1805704
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644419020840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |