Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12-
23] 61 sequences; 27,876,544 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq28 268 9e-67
>seq28
Length=749551
Score = 268 bits (296), Expect = 9e-67
Identities = 740/1126 (66%), Gaps = 29/1126 (3%)
Strand=Plus/Plus
Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777
||| | ||||||| ||||||||| || ||| || ||| | || || || |||| |
Sbjct 3348 TACAACTACTTTGGCTTCAAAACGCTCGAGCGCTCCTACTTGCTTCGCATTGACGGCAAG 3407
Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837
|| |||| || ||||| || |||| ||||| |||||| |||| |||||||| ||||||
Sbjct 3408 GTCGCCGAACGCCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATTCACGGGCACGAC 3467
Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTA---TACCATGGCC 93894
|| | || |||| | | | || |||| || | |||| |||| |||
Sbjct 3468 ATCGAGCGCGTCTTGCAGTCGTACAACCTCATGTCCGA---GCGGTACTTTACCCACGCC 3524
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954
| ||||| || |||||||| || || || || ||| | || ||||||||| || |
Sbjct 3525 TCGCCGACGCTCTTCAACGCCGGAACGCCTCACCCGCAGCTTTCGTCGTGTTTCTTGGTC 3584
Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014
|||| |||| || || ||| || || | ||||| |||||| || || ||||
Sbjct 3585 ACGATGAAGGATGATTCGATCGAAGGCATCTACGACACGCTCAAGACGTGCGCTCTCATC 3644
Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074
|| || ||| || || ||||| | || ||||| || | || || | || ||||||
Sbjct 3645 TCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCCTAC 3704
Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134
|| ||| || || ||| ||| |||||| ||||||| |||||||| |||| ||| |||
Sbjct 3705 ATTGCCGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAATAAC 3764
Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194
| ||||||||||| ||||| ||||| | | | || | |||||| |||| |||
Sbjct 3765 ACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTC 3824
Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254
||||| |||||||| ||||| | ||| | ||||| || |||||||||||||| ||
Sbjct 3825 GAGCCGTGGCACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAG 3884
Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314
| | || | || ||||| | || |||||| | || || || || ||| | ||
Sbjct 3885 GAAGTCCGCGCTCGTGATCTCTTTTTGGCGCTCTGGATTCCCGATCTCTTCATGGAGCGT 3944
Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374
|||||| | || |||| || || || ||| ||| ||||| || |||
Sbjct 3945 GTCGAGGCCGCCGGCGACTGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGTCTCCACGAA 4004
Query 94375 GTTTGTGGATCG-CGTTTTGAA-GACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCA 94432
|| | ||| || | || || | ||||| | |||||| | |||| ||||
Sbjct 4005 GTCTATGG--CGAAGAGTTCAAGGCCTTGTTCGAGAAATACGAAAAGGAGGGTCGCGCCA 4062
Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492
|||| || || ||||| ||| | || | || | ||||| || || |
Sbjct 4063 AGAAGACGATCCCCGCGCAAAAGCTTTGGTACGCAATTCTCGAGGCCCAGGTCGAAACTG 4122
Query 94493 GTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552
| | |||| ||| | | ||||||| | | ||| || || ||||| || |||| |
Sbjct 4123 GCAACCCCTTCATGCTCTACAAGGACGCCGCAAACAAGAAATCGAACCAAAAGAACCTTG 4182
Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612
| ||||||| |||||| ||||||||||||| ||||||| | | |||||||||
Sbjct 4183 GCACGATCAAGTCGTCGAATTTGTGCACCGAGATCATCGAGTACTCGGCGCCGGACGAGT 4242
Query 94613 TTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTAC-ACG 94671
|| || || ||| ||| ||| ||| || | | ||| | | ||| || ||
Sbjct 4243 GCGCCGTCTGCAACTTGGCCTCGATCGCGTTGCCGAGCTTCAT-CAAGA-----ACGGCG 4296
Query 94672 TCTACTGCTTCGTTCG-ATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAA 94730
| ||| ||| | | | || | ||| | || || | | | | || ||
Sbjct 4297 TGTACGACTT--TAAGAAGTTGCACGAGGTCGTCAAGGTTG---------TCGCTTTCAA 4345
Query 94731 CCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCT 94790
| ||||| | | |||||| |||| ||| |||||| |||||| ||||||| ||| |
Sbjct 4346 CTTGAACCGCATCATCGACGTCAACTACTATCCCGTCATCGAGGCGCAGAACTCCAACTT 4405
Query 94791 GAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCG 94836
|| || |||||||||||||| || || ||| | || ||||||
Sbjct 4406 CCGTCACCGCCCCATCGGCATCGGAGTGCAAGGTCTAGCCGACGCG 4451
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494722822773560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |