Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12- 23] 61 sequences; 27,876,544 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq28 268 9e-67 >seq28 Length=749551 Score = 268 bits (296), Expect = 9e-67 Identities = 740/1126 (66%), Gaps = 29/1126 (3%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| ||||||||| || ||| || ||| | || || || |||| | Sbjct 3348 TACAACTACTTTGGCTTCAAAACGCTCGAGCGCTCCTACTTGCTTCGCATTGACGGCAAG 3407 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||| || ||||| || |||| ||||| |||||| |||| |||||||| |||||| Sbjct 3408 GTCGCCGAACGCCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATTCACGGGCACGAC 3467 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTA---TACCATGGCC 93894 || | || |||| | | | || |||| || | |||| |||| ||| Sbjct 3468 ATCGAGCGCGTCTTGCAGTCGTACAACCTCATGTCCGA---GCGGTACTTTACCCACGCC 3524 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954 | ||||| || |||||||| || || || || ||| | || ||||||||| || | Sbjct 3525 TCGCCGACGCTCTTCAACGCCGGAACGCCTCACCCGCAGCTTTCGTCGTGTTTCTTGGTC 3584 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 |||| |||| || || ||| || || | ||||| |||||| || || |||| Sbjct 3585 ACGATGAAGGATGATTCGATCGAAGGCATCTACGACACGCTCAAGACGTGCGCTCTCATC 3644 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || || ||| || || ||||| | || ||||| || | || || | || |||||| Sbjct 3645 TCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCCTAC 3704 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 || ||| || || ||| ||| |||||| ||||||| |||||||| |||| ||| ||| Sbjct 3705 ATTGCCGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAATAAC 3764 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | ||||||||||| ||||| ||||| | | | || | |||||| |||| ||| Sbjct 3765 ACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTC 3824 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||||| ||||| | ||| | ||||| || |||||||||||||| || Sbjct 3825 GAGCCGTGGCACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAG 3884 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 | | || | || ||||| | || |||||| | || || || || ||| | || Sbjct 3885 GAAGTCCGCGCTCGTGATCTCTTTTTGGCGCTCTGGATTCCCGATCTCTTCATGGAGCGT 3944 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 |||||| | || |||| || || || ||| ||| ||||| || ||| Sbjct 3945 GTCGAGGCCGCCGGCGACTGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGTCTCCACGAA 4004 Query 94375 GTTTGTGGATCG-CGTTTTGAA-GACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCA 94432 || | ||| || | || || | ||||| | |||||| | |||| |||| Sbjct 4005 GTCTATGG--CGAAGAGTTCAAGGCCTTGTTCGAGAAATACGAAAAGGAGGGTCGCGCCA 4062 Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492 |||| || || ||||| ||| | || | || | ||||| || || | Sbjct 4063 AGAAGACGATCCCCGCGCAAAAGCTTTGGTACGCAATTCTCGAGGCCCAGGTCGAAACTG 4122 Query 94493 GTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552 | | |||| ||| | | ||||||| | | ||| || || ||||| || |||| | Sbjct 4123 GCAACCCCTTCATGCTCTACAAGGACGCCGCAAACAAGAAATCGAACCAAAAGAACCTTG 4182 Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612 | ||||||| |||||| ||||||||||||| ||||||| | | ||||||||| Sbjct 4183 GCACGATCAAGTCGTCGAATTTGTGCACCGAGATCATCGAGTACTCGGCGCCGGACGAGT 4242 Query 94613 TTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTAC-ACG 94671 || || || ||| ||| ||| ||| || | | ||| | | ||| || || Sbjct 4243 GCGCCGTCTGCAACTTGGCCTCGATCGCGTTGCCGAGCTTCAT-CAAGA-----ACGGCG 4296 Query 94672 TCTACTGCTTCGTTCG-ATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAA 94730 | ||| ||| | | | || | ||| | || || | | | | || || Sbjct 4297 TGTACGACTT--TAAGAAGTTGCACGAGGTCGTCAAGGTTG---------TCGCTTTCAA 4345 Query 94731 CCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCT 94790 | ||||| | | |||||| |||| ||| |||||| |||||| ||||||| ||| | Sbjct 4346 CTTGAACCGCATCATCGACGTCAACTACTATCCCGTCATCGAGGCGCAGAACTCCAACTT 4405 Query 94791 GAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCG 94836 || || |||||||||||||| || || ||| | || |||||| Sbjct 4406 CCGTCACCGCCCCATCGGCATCGGAGTGCAAGGTCTAGCCGACGCG 4451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722822773560