Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12-
23] 61 sequences; 27,876,544 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq47 147 2e-30
seq16 91.5 1e-13
>seq47
Length=1359276
Score = 147 bits (162), Expect = 2e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | |||||| || | ||| ||||| || || || ||||||||| |
Sbjct 567703 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 567644
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| ||| || ||||| || || ||| |||||||||||||||| || || ||
Sbjct 567643 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGA 567584
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
||||||||||||||| || || ||||| ||||| ||| ||||||| ||||||
Sbjct 567583 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGT-CGATCGTGTCCGAGGACTCGAC 567525
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| || | ||| ||||||||||| || || || || || |||||
Sbjct 567524 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 567477
Score = 134 bits (148), Expect = 1e-26
Identities = 158/211 (75%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963
|||||| || | ||| ||||| || || |||||||| ||| | | |||||| ||| ||
Sbjct 567914 CACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGCGAGCGTGCGGCCATCCTC 567855
Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023
||||| || ||||| ||||||||||||| || || || || || ||||||||||||
Sbjct 567854 GAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCCTG 567795
Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082
||| || |||| ||||| | | ||||||| |||||| |||| || | ||| |
Sbjct 567794 GATCTTGGTTTTGACGTTGT-CAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCT 567736
Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||||||||| || || || || ||||||||
Sbjct 567735 TGCCGGTCAGGGTCTTGACGAAGATCTGCAT 567705
Score = 131 bits (144), Expect = 2e-25
Identities = 157/211 (74%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963
|||||| || | ||| ||||| || || |||||||| ||| | | |||||| ||| ||
Sbjct 821693 CACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGCGAGCGTGCGGCCATCCTC 821634
Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023
||||| || ||||| ||||||||||||| || || || || || ||||||||||||
Sbjct 821633 GAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCCTG 821574
Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082
||| || |||| ||||| | | ||||||| |||||| |||| || | ||| |
Sbjct 821573 GATCTTGGTTTTGACGTTGT-CAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCT 821515
Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||||||||| || || || || || |||||
Sbjct 821514 TGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821484
Score = 131 bits (144), Expect = 2e-25
Identities = 160/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| |||||| || | ||| ||||| || || || ||||| ||| | | |||||| |
Sbjct 822154 CGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCA 822095
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || ||||| ||||||||||||| || || || || || |||||||||
Sbjct 822094 TCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGAATACCCTCCTTG 822035
Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077
||| ||| || |||| ||||| | | ||||||| |||||| |||| || |
Sbjct 822034 TCCTGGATCTTGGTTTTGACGTTGT-CAATCGTGTCCGAGGACTCGACCTCGAGCGTGAT 821976
Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| ||||||||||| || || || || || |||||
Sbjct 821975 CGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821940
Score = 129 bits (142), Expect = 6e-25
Identities = 172/235 (73%), Gaps = 3/235 (1%)
Strand=Plus/Minus
Query 126880 TACTGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTA 126939
||||| ||| || || | || | |||||| || | ||| ||||| || || ||||||||
Sbjct 568165 TACTG-TCCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTA 568107
Query 126940 ATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATC 126999
|||| | | |||||| ||| || ||||| || |||||| |||| | || || || ||
Sbjct 568106 ATCGGCGAGCGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTC 568047
Query 127000 GGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTAC 127058
|| || ||||||||||||||| || || ||||| ||||| | | |||||||
Sbjct 568046 TGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGT-CAATCGTGTCCGAGG 567988
Query 127059 TCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||||| |||| || | ||| ||||||||||| || || || || || |||||
Sbjct 567987 ACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 567933
Score = 122 bits (134), Expect = 8e-23
Identities = 155/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963
|||||| || | ||| ||||| || || || ||||||||| | | ||||||| ||| ||
Sbjct 821465 CACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGACCATCCTC 821406
Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023
||||| || |||||| |||| | || || || || || || || ||||||||||||
Sbjct 821405 GAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCCTG 821346
Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082
||| || |||| ||||| | | ||||||| |||||| |||| || | ||| |
Sbjct 821345 GATCTTGGTTTTGACGTTGT-CAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCT 821287
Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||||||||| || || || || || |||||
Sbjct 821286 TGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821256
Score = 113 bits (124), Expect = 4e-20
Identities = 153/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963
|||||| || | ||| ||||| || || || ||||||||| | | |||||| ||| ||
Sbjct 821921 CACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTC 821862
Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023
||||| || || || |||| | || || || || || || ||||||||||||||
Sbjct 821861 GAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTG 821802
Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082
||| || ||||| ||||| | | ||||||| |||||| |||| || | ||| |
Sbjct 821801 GATCTTGGCCTTGACGTTGT-CAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCT 821743
Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||||||||| || || || || || |||||
Sbjct 821742 TGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821712
>seq16
Length=975364
Score = 91.5 bits (100), Expect = 1e-13
Identities = 101/132 (77%), Gaps = 2/132 (2%)
Strand=Plus/Plus
Query 47439 TACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCC-AAGATTTACCA 47497
|||||||| || ||||||||||| || | || | || | | ||| ||| | | |
Sbjct 135322 TACATCGAGTTCGTCGCCGACCGATTGTTGGT-CGCCTTGGGCAACCCCAAGGTCTGGAA 135380
Query 47498 CACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTT 47557
| ||||||| || || || |||||||||| || ||||||||||||||||| ||||| ||
Sbjct 135381 CGCCGAGAACCCCTTTGACTTTATGAACATGATCTCGCTCGAGGGCAAGACAAACTTCTT 135440
Query 47558 CGAGAAGCGCGT 47569
||||||||| ||
Sbjct 135441 CGAGAAGCGTGT 135452
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475500437430640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |