Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12-
23] 61 sequences; 27,876,544 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq10 109 5e-19
seq24 98.7 9e-16
>seq10
Length=1963216
Score = 109 bits (120), Expect = 5e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | || | ||| || || || ||||||||||| || || |||
Sbjct 1805559 ATGCCACCTCGGAGGCGGAGGACCAAATGGAGGGTCGACTCCTTTTGGATGTTGTAGTCG 1805618
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| ||| || | || || || ||| | || | ||||||||||| |||
Sbjct 1805619 GCCAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGC 1805678
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| |||||||| || ||||| || || |||| || | || | |||||||| |||||
Sbjct 1805679 GGGATGCCTTCCTTGTCTTGGATCTTGGTCTTGA-CGTTGTCGATCGTGTCGGACGACTC 1805737
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGC 45338
||| ||||| || | ||| ||||| || ||||| || ||||| ||||||
Sbjct 1805738 GACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGC 1805786
>seq24
Length=1725410
Score = 98.7 bits (108), Expect = 9e-16
Identities = 145/203 (71%), Gaps = 2/203 (1%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || || |||||||| || || |||||| || || ||| || | ||
Sbjct 1413395 TGGAGGGTCGACTCCTTTTGAATGTTGTAATCGGCGAGAGTGCGGCCATCCTCGAGCTGC 1413454
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || ||| | || | ||||||||||| ||||| |||||||| || ||||| || ||
Sbjct 1413455 TTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTTG 1413514
Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
|||| || | || | |||||||| |||||||| ||||| || | || ||||| ||
Sbjct 1413515 GTCTTGA-CGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGT 1413573
Query 45317 TAGAGTTTTTACAAAAATTTGCA 45339
|| || || ||||| |||||||
Sbjct 1413574 GAGGGTCTTGACAAAGATTTGCA 1413596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452002855347560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |