Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12-
23] 61 sequences; 27,876,544 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq28 206 3e-48
seq24 120 4e-22
seq29 98.7 1e-15
>seq28
Length=749551
Score = 206 bits (228), Expect = 3e-48
Identities = 563/852 (66%), Gaps = 19/852 (2%)
Strand=Plus/Minus
Query 116431 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 116490
||||| || |||| || || || | | ||| ||| | | |||||| || || ||
Sbjct 4270 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCG 4211
Query 116491 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 116550
|| |||||||| || ||| || ||||| | ||||||||| || || || ||||
Sbjct 4210 GTGCACAAATTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCG 4151
Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610
|| |||||||||||||| | || | || || || |||| || |||||| || | |
Sbjct 4150 GCGTCCTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTAC 4091
Query 116611 CATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 116669
|| | | | ||| | || | || ||||| || ||||||| ||||| || | |
Sbjct 4090 CAAAGCTTTTGCG-CGGGGATCGTCTTCTTGGCGCGACCCTCCTTTTCGTATTTCTCGAA 4032
Query 116670 GAGGGCCTCAAACTCTTCACCCACAGCCTCTGAG-AGCCCTGGTGCCTTATCTGGACAGA 116728
| ||||| |||||||| || | || || | | || || || || | | || ||||
Sbjct 4031 CAAGGCCTTGAACTCTTCGCC-ATAGACTTCGTGGAGACCGGGGGCTTCGGCGGGGCAGA 3973
Query 116729 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 116788
|||| | ||| | || | |||| || |||| ||||||||| || || ||||||||||
Sbjct 3972 AGAGGGGCCAGTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCG 3913
Query 116789 CCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 116848
|| | |||||||| ||| ||| |||| || | || || || || | |||| |
Sbjct 3912 CCAAAAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGA 3853
Query 116849 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACG-- 116906
| || | || || ||||||||||| || ||||| | ||||| | || | ||||
Sbjct 3852 ACTCGAAGACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCC---GGGACGCT 3796
Query 116907 ----ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGA 116962
||| | |||| || || | ||| || || | || || ||||| || | ||
Sbjct 3795 TGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTATTGTAGACACGGAGCATGGGGACGA 3736
Query 116963 TACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTG 117020
| || | || | ||| || || || || || ||| | | | || | || | |||
Sbjct 3735 TGCCGTTCGAGTAGCCGTTCGTGCCGGCAATGTAGGAGCC--GGTCGCGCGGATGTTGTG 3678
Query 117021 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCC 117080
|||| || ||| ||||| || || ||| ||||| | |||||| | |||| || |
Sbjct 3677 GATGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGAGCGCACGTCTTGAGCGTGTC 3618
Query 117081 GTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGG 117140
|||||| || |||||||| ||| |||| | | || | ||| || ||| | || ||
Sbjct 3617 GTAGATGCCTTCGATCGAATCATCCTTCATCGTGACCAAGAAACACGACGAAAGCTGCGG 3558
Query 117141 CCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACC-TTGGGACA 117199
|| || || ||||||||||| || || | |||||| | || |||| | |||||
Sbjct 3557 GTGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGT-AAAGTACCGCTCGGACA 3499
Query 117200 TCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCC 117259
| | ||| | || |||||| ||||| | ||||||||| |||| | ||| |
Sbjct 3498 TGAGGTTGTACGACTGCAAGACGCGCTCGATGTCGTGCCCGTGAATGCCGACGGCGACAC 3439
Query 117260 GCATAAACATGT 117271
|||| | |||||
Sbjct 3438 GCATGAGCATGT 3427
>seq24
Length=1725410
Score = 120 bits (132), Expect = 4e-22
Identities = 293/433 (68%), Gaps = 17/433 (4%)
Strand=Plus/Minus
Query 176546 CCCTTGGAAGCCTTGATGATTGGTGTCACCA--TTGAGACCACAAACCC--CAACTTGAG 176601
||||||| ||||||| ||| || || | | | ||| | | || ||| || ||||||
Sbjct 581880 CCCTTGGTCGCCTTGACGATGGGGGTGATAAACTCGAG-CAAGAAGCCCTTCAGCTTGAG 581822
Query 176602 GAGGGATGGCCAGAAGTAGTGGATCATATTGAGGATGAGACCCTTAATGTGTGAACCATC 176661
| || || | |||| | || | |||| ||| |||||||| || || || |||||
Sbjct 581821 CAACGAAGGGAACCAGTAATCGAGGAAGTTGATGATCAGACCCTTGATATGCGATCCATC 581762
Query 176662 GTTATCCGCATCCGTCATAATCATGAGCCGACCATAGCGAAGCTCGGAAACATCTTGATA 176721
|| ||| ||| | ||| ||||||||| || || || ||| | || || ||
Sbjct 581761 GTGATCTTGATCGGCCATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTCGGTGTA 581702
Query 176722 ATCCTTACCTTGTTGAAGACCCAAAATCTTCTTGAGATCATTGAACTCTTGGTTTGATGT 176781
| | || || || || |||||||| |||| ||||| | ||||| ||| || | |||
Sbjct 581701 AACTTTGCCCTGCTGCAGACCCAAGATCTGCTTGATCGC-TTGAA-TCTCGGCAT--TGT 581646
Query 176782 -GAGTTGCGCCA---CTGAAGCGTCGCGGACATTTTTACACTTCCCGCGGAGAGGGAACA 176837
||| | || | | || || || || || |||| || || | |||||| |
Sbjct 581645 CGAGGAGGGCTTTGCCCGCCGCTTCACGCACGTTGAGCAACTTTCCTCGCAAAGGGAAGA 581586
Query 176838 CACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAAT 176897
|||| |||| || ||||| || |||| ||||| | || ||||| | ||| |||||||
Sbjct 581585 CACCATAGTTGTCTCGACCGACGACAGCCAGACCCGAGACGGCGAGCGCCTTGGCGGAAT 581526
Query 176898 CACCCTCCGTCACGATGAGCGTACACTTT--CCAGATTGTGCCGTCCCCGCCTTGTTCGC 176955
| || || |||| ||||||||| ||||| || | | | ||| || || ||||||||
Sbjct 581525 CTCCTTCGGTCAAGATGAGCGTGCACTTGGACCCGTTCCT--CGTACCAGCGTTGTTCGC 581468
Query 176956 ATCGTCCAACTTG 176968
||| || | ||||
Sbjct 581467 ATCTTCGAGCTTG 581455
>seq29
Length=1745553
Score = 98.7 bits (108), Expect = 1e-15
Identities = 200/297 (67%), Gaps = 0/297 (0%)
Strand=Plus/Plus
Query 10552 TGGCTCGTGAAGAATTATCGCGAATCCTATGGTCTCTTTGTGTGCTCCGGTATTCTCTTC 10611
||| |||| || || || ||||| | || | | | | | |||| |||||| | |||
Sbjct 71356 TGGATCGTCAAAAACTACCGCGAGGCGTACGATATGTACGCGTGCAACGGTATCTTGTTC 71415
Query 10612 AACCACGAGTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACCGATGGTATC 10671
||||||||||| || |||||||| | || || |||| ||||||| || | | ||
Sbjct 71416 AACCACGAGTCCCCGCGTCGTGGTCGCACCTTTGTCACAAGGAAGATCTCCCGAGCTGTC 71475
Query 10672 AAACAAATCGTGGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGG 10731
| ||| | ||| | ||| | | | | | || || | | ||| || |
Sbjct 71476 GCCGAGATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAATATGGAGGCCAAGCGT 71535
Query 10732 GACTGGGGACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTCCAACAAGAAGAG 10791
|| ||||||||||| ||||| || || | |||||| | || || ||||| ||
Sbjct 71536 GATTGGGGACACGCGTGCGACTACGTCGAGGGTATGTGGAGGATGCTGCAGCAAGACAAG 71595
Query 10792 GCGGACGAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 10848
| ||||| | |||| |||||||||| ||||| ||| |||||| ||||||||| |||
Sbjct 71596 CCTGACGACTTTGTCCTCGCGACGGGTGAGACCCACCCCGTCAAGGAGTTCGTCGAG 71652
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506732200760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |