Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12- 23] 61 sequences; 27,876,544 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq28 91.5 2e-13 >seq28 Length=749551 Score = 91.5 bits (100), Expect = 2e-13 Identities = 340/525 (65%), Gaps = 6/525 (1%) Strand=Plus/Minus Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224 |||||| || || ||| ||||| || | |||| |||||||| || | | | | || Sbjct 3941 CTCCATGAAGAGATCGGGAATCCAGAGCGCCAAAAAGAGATCACGAGCGCGGACTTCCTC 3882 Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTA 205283 | || ||||||| | |||||| || || | | ||| |||||||||||||| | Sbjct 3881 CTTGCCGTGGTTCTTGCGAAGGTCCAGG-AACTCGAAGACGTCAGCGTGCCACGGCTCGA 3823 Query 205284 ACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCG 205343 | | || | || || || | |||||| ||||| ||||| || ||| | | Sbjct 3822 GGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGT 3763 Query 205344 CGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGG 205403 ||| | || || ||||| || || | ||||| | | |||||||||| | ||| Sbjct 3762 TATTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTGCCGGCAATGT 3703 Query 205404 CCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGA 205463 ||||| || | | |||| |||| | || || || || | ||||| || Sbjct 3702 AGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTGGAGA 3643 Query 205464 TCTGGGCGCAC-TCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC 205522 | | |||||| ||||| || ||| |||||||||| |||| ||||| ||| || || Sbjct 3642 TGAGAGCGCACGTCTTG-AGCGTGTCGTAGATGCCTTCGATCGAATCATCCTTCATCGTG 3584 Query 205523 ACCAGATAGCACGAAGCCAGCT-TGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCT 205581 |||| | ||||| | |||| || || || || |||| ||||||||| || Sbjct 3583 ACCAAGAAACACGACGAAAGCTGCGGGTGAG-GCGTTCCGGCGTTGAAGAGCGTCGGCGA 3525 Query 205582 GGCGTGGCTGAAGCGCTTCTCGCTCAAACACCTGTAGGTCTCCAGCACGCTCTCCAGATC 205641 ||||||| | ||| | |||| || |||| | || || |||| ||| | || Sbjct 3524 GGCGTGGGTAAAGTACCGCTCGGACATGAGGTTGTACGACTGCAAGACGCGCTCGATGTC 3465 Query 205642 GAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGG 205686 | |||||||| || | ||||| | ||||| | ||| || || Sbjct 3464 GTGCCCGTGAATGCCGACGGCGACACGCATGAGCATGTGCTGCGG 3420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154593694160