Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12-
23] 61 sequences; 27,876,544 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq34 374 1e-98
seq25 167 3e-36
seq31 156 5e-33
seq29 86.0 8e-12
seq24 84.2 3e-11
>seq34
Length=2291677
Score = 374 bits (414), Expect = 1e-98
Identities = 660/960 (69%), Gaps = 5/960 (1%)
Strand=Plus/Minus
Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069
||||| || | ||||||||| ||||| | || ||||| || || ||||||||||||||
Sbjct 1815329 TCACCAGTGAGGATGGCGGCCTGGACAGCGGCACCGTAGGCAACGGCCTCATCGGGGTTG 1815270
Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129
|| | || || | || || ||||| || || ||||| | | || || | || |||
Sbjct 1815269 ATGGACTTGTTAGGCTCCTTGCCGTTGAAGTAGTCCGAGACGAGTTTCTGGACCTTGGGG 1815210
Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189
|| || || || ||||| || | ||||| || | || | || |||||||| ||
Sbjct 1815209 ATACGAGTGGAGCCACCAACGAGGACGATCTCGTGGACGGAAGCCTTGTCGATCTTGGAA 1815150
Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249
|| ||||| || ||||| || ||||| |||||||||||| |||| |||
Sbjct 1815149 TCGCGAAGGACCTTCTCGACGGGGTCCATGGTGCCACGGAACAAGTCTTGGCACAACTCC 1815090
Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309
|| || || ||||| || ||||| || ||||| || | || ||| | | ||| || ||
Sbjct 1815089 TCGAAGCGAGCACGAGTGATGGAGGTGTAGAAGTCGATACCCTCGAAGAGCGAGTCGATC 1815030
Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369
|| ||||| || || || | ||||| | |||||||| || ||||| || || || ||
Sbjct 1815029 TCGATGGTAGTCTGGGCGGCGGAAGAGAGGGTTCGCTTGGCACGCTCGCAGGCAGTGCGG 1814970
Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429
| |||||| || ||||| | ||| || | ||||||||| | || || || |||||
Sbjct 1814969 AGACGACGGAGAGCACGGGCGTTGGACGAGAGATCTTTCTTGTTCTTGCGCTTGAACTCG 1814910
Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489
| |||||| | ||||| ||||| || ||||| |||||||| || || ||
Sbjct 1814909 GCGACGAAGTGAGTGACGAGTCGGTTGTCGAAGTCCTCACCTCCCAAGTGGGTGTCACCG 1814850
Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549
||||| || ||||| || |||||||| | |||||| | || | || ||||| |||||
Sbjct 1814849 GCGGTGGCCTTGACCTCGAAGATACCCTCCTCAATGGTCAAAAGGGAGACATCGAACGTT 1814790
Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609
|| || || || || || ||||| |||||| | ||| | | | ||||| ||||| |||
Sbjct 1814789 CCTCCTCCGAGATCGAAGATGAGGACGTTCTTCTCGCCAACGGTCTTCTTGTCGAGGCCG 1814730
Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669
|| ||||| || || || || || || ||||||||||| || ||| ||||| | ||
Sbjct 1814729 TAAGCGATGGCGGCAGCAGTGGGCTCGTTAATAATACGGAGGACGTTGAGGCCCGAGATG 1814670
Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729
| ||||| || || |||||||| ||||||||||| |||||||| ||||| || |||
Sbjct 1814669 ACACCGGCATCCTTGGTGGCTTGTCGCTGCGAATCGTTGAAGTAGGCGGGGACAGTGACG 1814610
Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789
|| |||| | ||| || | || || || | || ||| | || ||||| ||| ||
Sbjct 1814609 ACGGCGTTGGAGACGGTCGTGCCCAGGTAGGCCTCAGCGGTCTCCTTCATCTTGAGCAGG 1814550
Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCA 7849
| ||| || || || || || | | ||||| || || || || |||| || |
Sbjct 1814549 ATCATGGACGAGATTTCCTCGGGGGTGAACTGCTTGGTCTCGCCTCGGTAATCGACCTGG 1814490
Query 7850 ATCATGGGTTTATCCGCAG-CACCGGGGATAACCTTATACGACCAATCTTTCATATCGTC 7908
|| | ||| || | || | | ||| ||||| | | ||| | ||||| |||
Sbjct 1814489 ATGACGGGCTT----GGAGTCCTTGTCGATGACCTTGAAGGGCCAGTGCTTCATGTCGGA 1814434
Query 7909 TTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTT 7968
||||||| || || |||||| || || || ||||| ||||| || || |||||
Sbjct 1814433 CTGGACCTCGCTATCGGACCACTTTCGGCCAATGAGTCGCTTGGCATCGAAGACGGTGTT 1814374
>seq25
Length=2644084
Score = 167 bits (184), Expect = 3e-36
Identities = 525/807 (65%), Gaps = 15/807 (2%)
Strand=Plus/Minus
Query 7012 ACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAAT 7071
||| || |||| |||||| || || | || ||||| || || |||||||||||||| ||
Sbjct 815005 ACCGGTCAAGACGGCGGCCTGAACGGCGGCACCGTAGGCAACGGCCTCATCGGGGTTGAT 814946
Query 7072 CGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGAT 7131
|| || |||| || | || || | || || | | || || || |||||
Sbjct 814945 CGACTTGTTCAATTGTCGGCCACCGAAGAACTCGGAAACGAGCGACTGGATCTTGGGGAT 814886
Query 7132 TCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC 7191
|| ||||| |||||||| | ||||| || | || || | |||| ||| | |||
Sbjct 814885 ACGGGTCGAGCCACCGACGAGGACGATGTCGTCGACCTTGGTGCGGTCGACCTTGGCGTC 814826
Query 7192 TCGAAGTGTTTTTTCGACAGGTTCCATACATTTA-CGGAACAAGTCCATACACAGTTCCT 7250
|| || ||||| || || | | | | ||||| | | | ||||
Sbjct 814825 CTTGAGGACCTTCTCGACGGGGTCGAG-CGTGGAGCGGAAGGTGGCGGCGTTGATCTCCT 814767
Query 7251 CAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTT 7310
| || || ||||||| || || | | |||| || || | | | | ||| || | |
Sbjct 814766 CGAACCGGGCACGGGAGATCGAGGCAGAGAAGTCGGTACCTTGGAAGAGCGAGTCGACCT 814707
Query 7311 CAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTA 7370
| | ||| || || | || || | || ||||| || ||||| ||||| | ||| |
Sbjct 814706 CGACGGTCGTCTGCGTAACGGACGAAAGGGTGCGCTTGGCACGCTCGCACGCGGATCGGA 814647
Query 7371 AACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTT 7430
|||||| || |||||||||| |||| || || ||| | || | | |||||| |
Sbjct 814646 GACGACGGAGAGCACGCGGGTCCTCGGAGATGTCGAGCTTGTTCTTCCTCTCAAACTCCT 814587
Query 7431 CAGAGAAGTG-TCGAAGGAGTC-TCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCC 7488
|||||| || ||| | | | | || || || |||||||||||||| || || ||
Sbjct 814586 TCTTGAAGTGCTCCAAGAGGGCGTTG--TCAAAGTCCTCACCACCCAAGTGGGTGTCACC 814529
Query 7489 CGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGT 7548
|| || || ||||| | |||| ||| || ||| | || | ||| ||||| || ||
Sbjct 814528 AGCAGTGGCCTTGACGGCGAAGACACCACCCGAGATGGTCAAGAGCGAGACATCGAAAGT 814469
Query 7549 ACCACCACCCAGGTCAAAAATGAGTACGTTCGTATC-------GTCGTCT--TTGTTCTT 7599
|| || || || || || ||||| ||| | | || | | ||| || ||
Sbjct 814468 TCCTCCTCCAAGATCGAAGATGAGAACGAGCTTCTCCTTCTTGGACTTCTCGGTGGCCTC 814409
Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659
| | |||||||| ||||| || || || || || || || || ||||| || || ||
Sbjct 814408 ACCCAGACCGTAGGCGATTGCAGCGGCGGTGGGCTCGTTGATGATACGGAGCACGTCCAA 814349
Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719
|| || || ||| | || || || |||| | || ||||| ||||| ||||| || ||
Sbjct 814348 ACCGGCGATCGTTCCGGCGTCCTTGGTCGAGAGACGCTGCGAGTCGTTGAAGTAAGCGGG 814289
Query 7720 GACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779
||| || ||||| || | | |||| | ||| ||||| | | || ||| | || || |
Sbjct 814288 GACGGTGACGACGGCCTTCTTGACCTCCTTGCCGAGTTTGGTCTCGGCGGTCTCCTTGAG 814229
Query 7780 TTTGGTAAGAACCATCGATGAAATCTC 7806
|||| ||| ||||| || || |||||
Sbjct 814228 CTTGGAAAGGACCATGGACGAGATCTC 814202
Score = 107 bits (118), Expect = 2e-18
Identities = 116/153 (76%), Gaps = 3/153 (2%)
Strand=Plus/Minus
Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052
||| |||| ||| || || ||||| || | | | || || |||||||| || |||||
Sbjct 813947 CTTGGCCGAGTCACCAATGAGACGCTCGGTCT---CGGTGAAGGCGACGTAAGAAGGGGT 813891
Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112
|| || || || |||||||| || || || || || ||||||||||||||||| |||||
Sbjct 813890 GGTGCGGTTACCCTGGTCGTTGGCGATGATCTCGACTCGGTCGTTTTGCCAGACACCGAC 813831
Query 8113 GCACGAATACGTTGTTCCTAAATCAATACCGAT 8145
||| || || || ||||| | ||| ||||| ||
Sbjct 813830 GCAGGAGTAGGTGGTTCCAAGATCGATACCTAT 813798
>seq31
Length=1942871
Score = 156 bits (172), Expect = 5e-33
Identities = 231/327 (71%), Gaps = 3/327 (1%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || |||||||||||||| || || || ||||| || ||| ||||||| |||
Sbjct 70649 TCGAAGTCCTCACCACCCAAGTGGGTGTCACCGGCGGTGGCCAAGACCTCAAAGACACCG 70590
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
|||| || | | ||| ||||| ||||| || || || || || | | || | |
Sbjct 70589 TCTTCGATCGAGAGGAGCGAGACATCGAACGTTCCTCCTCCGAGATCGTAGACGATGATG 70530
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| | | | |||| ||||||||||| ||||| || || || || || ||
Sbjct 70529 TTGCGCTCGCCACC---GGTCTTGTCGAGACCGTAGGCGATCGCGGCGGCAGTGGGCTCG 70473
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| | | || ||| |||||| || || || || | || || || ||||||||||||
Sbjct 70472 TTGACGACTCGGAGAACGTTCAGACCGGCGATCGTGCCAGCGTCCTTGGTCGCTTGTCGT 70413
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| | ||||| |||||||||||||| || ||||| |||| ||||| ||||| || |
Sbjct 70412 TGAGCGTCGTTGAAGTAGGCCGGGACGGTGACGACGGCGTGGGTGACCTTCTTGCCCAAG 70353
Query 7757 TACGATTCCGCGATATCTTTCATTTTG 7783
|| | || ||| | || ||||| |||
Sbjct 70352 TAGGCCTCGGCGGTCTCCTTCATCTTG 70326
Score = 100 bits (110), Expect = 4e-16
Identities = 132/183 (72%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 7601 TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGG 7660
|||||||||||||||| || || || || || || || || | ||| || || ||
Sbjct 1623472 TCGAGACCGTACGCGAGGGCAGCGGCGGTGGGCTCGTTGATGACACGGAGCACGTCAAGA 1623531
Query 7661 CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGG 7720
|| || || || | || || || ||||| ||||| ||||| ||||| |||||||| |||
Sbjct 1623532 CCCGCGATCGTACCGGCGTCCTTGGTCGCCTGTCGCTGCGAGTCGTTGAAGTAGGCGGGG 1623591
Query 7721 ACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATT 7780
|| || ||||| |||| | |||| ||| ||||| || || ||| | || |||||
Sbjct 1623592 ACAGTGACGACGGCGTGCTTGACCGGCTTTCCGAGGTAGCCCTCGGCGGTCTCCTTCATC 1623651
Query 7781 TTG 7783
|||
Sbjct 1623652 TTG 1623654
>seq29
Length=1745553
Score = 86.0 bits (94), Expect = 8e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 22585 TACGGTATGTTTGCATGCAATGGTATAATGTTCAACCACGAATCACCGAGACGGGGTGAA 22644
|||| ||||| || ||||| ||||| ||||||||||||| || ||| | || |||
Sbjct 71383 TACGATATGTACGCGTGCAACGGTATCTTGTTCAACCACGAGTCCCCGCGTCGTGGTCGC 71442
Query 22645 AACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAATATCAGTGCAGGTAAACAAAAA 22704
| ||| || ||| | || || | | | |||||| | ||| ||| |||| |
Sbjct 71443 ACCTTTGTCACAAGGAAGATCTCCCGAGCTGTCGCCGAGATCTCGCTCGGTCAACAGGAC 71502
Query 22705 TGTTTATACCTTGGTAACCTAGATGCGAAACGAGATTGGGGTCATGCACGCGATTACGTG 22764
|| | ||||| || || | || || || || |||||||| || || |||| |||||
Sbjct 71503 TGCCTCTACCTCGGCAATATGGAGGCCAAGCGTGATTGGGGACACGCGTGCGACTACGTC 71562
Query 22765 AAATGTATGTGGAAAATATTACAACAAGATAAACCGGAAGATTTTGT 22811
| ||||||||| || | || ||||| || || || || |||||
Sbjct 71563 GAGGGTATGTGGAGGATGCTGCAGCAAGACAAGCCTGACGACTTTGT 71609
>seq24
Length=1725410
Score = 84.2 bits (92), Expect = 3e-11
Identities = 220/334 (66%), Gaps = 4/334 (1%)
Strand=Plus/Minus
Query 184049 ATAAGTCCCTTGATATGACTTCCATCGTTATCTGCATCGGTCATGATCATGAGTCTTCCG 184108
|| || ||||||||||| |||||||| |||| ||||| |||||||||||| | |||
Sbjct 581787 ATCAGACCCTTGATATGCGATCCATCGTGATCTTGATCGGCCATGATCATGAGCTTGCCG 581728
Query 184109 TATCTGAGTTCGGAGAGTGATGTATACACTTTCCCTTGCTGAAGCCCCAAAATCTTTTTA 184168
|| | ||| | || || || ||||| || ||||| || ||||| |||| ||
Sbjct 581727 TAACGGAGCGAGTCGACGTCGGTGTAAACTTTGCCCTGCTGCAGACCCAAGATCTGCTTG 581668
Query 184169 AGATCATTAAACTCCTTGTTTTCGGTAAGTTGTTTTACACTCGCGTCACGCACGTTCTTA 184228
| | | || ||| || ||| || ||| | ||| |||||||||||
Sbjct 581667 ATCGCTTGAATCTCGGCATTGTCGAGGAGGGCTTTGCCCGCCGCTTCACGCACGTTGAGC 581608
Query 184229 CATTTACCCCTAAGCGGAAAAACACCGTAATGATCACGACCAACAACTGAAAGACCAGCA 184288
| || || | | || || ||||| || | || ||||| || || | ||||| |
Sbjct 581607 AACTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCGACGACAGCCAGACCCGAG 581548
Query 184289 ATTGCAAGTGTTTTTGCAGAATCACCTTCGGTAATAATAAGAGTACACTT--ACCAGAGT 184346
| || || | || || ||||| |||||||| | || || || ||||| ||| ||
Sbjct 581547 ACGGCGAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGCGTGCACTTGGACC--CGT 581490
Query 184347 GTGTGGTACCGGCTTTATTGGCATCGTCGAGTTT 184380
| ||||| || || || ||||| ||||| ||
Sbjct 581489 TCCTCGTACCAGCGTTGTTCGCATCTTCGAGCTT 581456
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635132315711240
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