Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12- 23] 61 sequences; 27,876,544 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq34 374 1e-98 seq25 167 3e-36 seq31 156 5e-33 seq29 86.0 8e-12 seq24 84.2 3e-11 >seq34 Length=2291677 Score = 374 bits (414), Expect = 1e-98 Identities = 660/960 (69%), Gaps = 5/960 (1%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| || | ||||||||| ||||| | || ||||| || || |||||||||||||| Sbjct 1815329 TCACCAGTGAGGATGGCGGCCTGGACAGCGGCACCGTAGGCAACGGCCTCATCGGGGTTG 1815270 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || | || || ||||| || || ||||| | | || || | || ||| Sbjct 1815269 ATGGACTTGTTAGGCTCCTTGCCGTTGAAGTAGTCCGAGACGAGTTTCTGGACCTTGGGG 1815210 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || ||||| || | ||||| || | || | || |||||||| || Sbjct 1815209 ATACGAGTGGAGCCACCAACGAGGACGATCTCGTGGACGGAAGCCTTGTCGATCTTGGAA 1815150 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || ||||| || ||||| || ||||| |||||||||||| |||| ||| Sbjct 1815149 TCGCGAAGGACCTTCTCGACGGGGTCCATGGTGCCACGGAACAAGTCTTGGCACAACTCC 1815090 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || || || ||||| || ||||| || ||||| || | || ||| | | ||| || || Sbjct 1815089 TCGAAGCGAGCACGAGTGATGGAGGTGTAGAAGTCGATACCCTCGAAGAGCGAGTCGATC 1815030 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || ||||| || || || | ||||| | |||||||| || ||||| || || || || Sbjct 1815029 TCGATGGTAGTCTGGGCGGCGGAAGAGAGGGTTCGCTTGGCACGCTCGCAGGCAGTGCGG 1814970 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | |||||| || ||||| | ||| || | ||||||||| | || || || ||||| Sbjct 1814969 AGACGACGGAGAGCACGGGCGTTGGACGAGAGATCTTTCTTGTTCTTGCGCTTGAACTCG 1814910 Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489 | |||||| | ||||| ||||| || ||||| |||||||| || || || Sbjct 1814909 GCGACGAAGTGAGTGACGAGTCGGTTGTCGAAGTCCTCACCTCCCAAGTGGGTGTCACCG 1814850 Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549 ||||| || ||||| || |||||||| | |||||| | || | || ||||| ||||| Sbjct 1814849 GCGGTGGCCTTGACCTCGAAGATACCCTCCTCAATGGTCAAAAGGGAGACATCGAACGTT 1814790 Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609 || || || || || || ||||| |||||| | ||| | | | ||||| ||||| ||| Sbjct 1814789 CCTCCTCCGAGATCGAAGATGAGGACGTTCTTCTCGCCAACGGTCTTCTTGTCGAGGCCG 1814730 Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669 || ||||| || || || || || || ||||||||||| || ||| ||||| | || Sbjct 1814729 TAAGCGATGGCGGCAGCAGTGGGCTCGTTAATAATACGGAGGACGTTGAGGCCCGAGATG 1814670 Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729 | ||||| || || |||||||| ||||||||||| |||||||| ||||| || ||| Sbjct 1814669 ACACCGGCATCCTTGGTGGCTTGTCGCTGCGAATCGTTGAAGTAGGCGGGGACAGTGACG 1814610 Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789 || |||| | ||| || | || || || | || ||| | || ||||| ||| || Sbjct 1814609 ACGGCGTTGGAGACGGTCGTGCCCAGGTAGGCCTCAGCGGTCTCCTTCATCTTGAGCAGG 1814550 Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCA 7849 | ||| || || || || || | | ||||| || || || || |||| || | Sbjct 1814549 ATCATGGACGAGATTTCCTCGGGGGTGAACTGCTTGGTCTCGCCTCGGTAATCGACCTGG 1814490 Query 7850 ATCATGGGTTTATCCGCAG-CACCGGGGATAACCTTATACGACCAATCTTTCATATCGTC 7908 || | ||| || | || | | ||| ||||| | | ||| | ||||| ||| Sbjct 1814489 ATGACGGGCTT----GGAGTCCTTGTCGATGACCTTGAAGGGCCAGTGCTTCATGTCGGA 1814434 Query 7909 TTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTT 7968 ||||||| || || |||||| || || || ||||| ||||| || || ||||| Sbjct 1814433 CTGGACCTCGCTATCGGACCACTTTCGGCCAATGAGTCGCTTGGCATCGAAGACGGTGTT 1814374 >seq25 Length=2644084 Score = 167 bits (184), Expect = 3e-36 Identities = 525/807 (65%), Gaps = 15/807 (2%) Strand=Plus/Minus Query 7012 ACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAAT 7071 ||| || |||| |||||| || || | || ||||| || || |||||||||||||| || Sbjct 815005 ACCGGTCAAGACGGCGGCCTGAACGGCGGCACCGTAGGCAACGGCCTCATCGGGGTTGAT 814946 Query 7072 CGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGAT 7131 || || |||| || | || || | || || | | || || || ||||| Sbjct 814945 CGACTTGTTCAATTGTCGGCCACCGAAGAACTCGGAAACGAGCGACTGGATCTTGGGGAT 814886 Query 7132 TCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC 7191 || ||||| |||||||| | ||||| || | || || | |||| ||| | ||| Sbjct 814885 ACGGGTCGAGCCACCGACGAGGACGATGTCGTCGACCTTGGTGCGGTCGACCTTGGCGTC 814826 Query 7192 TCGAAGTGTTTTTTCGACAGGTTCCATACATTTA-CGGAACAAGTCCATACACAGTTCCT 7250 || || ||||| || || | | | | ||||| | | | |||| Sbjct 814825 CTTGAGGACCTTCTCGACGGGGTCGAG-CGTGGAGCGGAAGGTGGCGGCGTTGATCTCCT 814767 Query 7251 CAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTT 7310 | || || ||||||| || || | | |||| || || | | | | ||| || | | Sbjct 814766 CGAACCGGGCACGGGAGATCGAGGCAGAGAAGTCGGTACCTTGGAAGAGCGAGTCGACCT 814707 Query 7311 CAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTA 7370 | | ||| || || | || || | || ||||| || ||||| ||||| | ||| | Sbjct 814706 CGACGGTCGTCTGCGTAACGGACGAAAGGGTGCGCTTGGCACGCTCGCACGCGGATCGGA 814647 Query 7371 AACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTT 7430 |||||| || |||||||||| |||| || || ||| | || | | |||||| | Sbjct 814646 GACGACGGAGAGCACGCGGGTCCTCGGAGATGTCGAGCTTGTTCTTCCTCTCAAACTCCT 814587 Query 7431 CAGAGAAGTG-TCGAAGGAGTC-TCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCC 7488 |||||| || ||| | | | | || || || |||||||||||||| || || || Sbjct 814586 TCTTGAAGTGCTCCAAGAGGGCGTTG--TCAAAGTCCTCACCACCCAAGTGGGTGTCACC 814529 Query 7489 CGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGT 7548 || || || ||||| | |||| ||| || ||| | || | ||| ||||| || || Sbjct 814528 AGCAGTGGCCTTGACGGCGAAGACACCACCCGAGATGGTCAAGAGCGAGACATCGAAAGT 814469 Query 7549 ACCACCACCCAGGTCAAAAATGAGTACGTTCGTATC-------GTCGTCT--TTGTTCTT 7599 || || || || || || ||||| ||| | | || | | ||| || || Sbjct 814468 TCCTCCTCCAAGATCGAAGATGAGAACGAGCTTCTCCTTCTTGGACTTCTCGGTGGCCTC 814409 Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659 | | |||||||| ||||| || || || || || || || || ||||| || || || Sbjct 814408 ACCCAGACCGTAGGCGATTGCAGCGGCGGTGGGCTCGTTGATGATACGGAGCACGTCCAA 814349 Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719 || || || ||| | || || || |||| | || ||||| ||||| ||||| || || Sbjct 814348 ACCGGCGATCGTTCCGGCGTCCTTGGTCGAGAGACGCTGCGAGTCGTTGAAGTAAGCGGG 814289 Query 7720 GACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 ||| || ||||| || | | |||| | ||| ||||| | | || ||| | || || | Sbjct 814288 GACGGTGACGACGGCCTTCTTGACCTCCTTGCCGAGTTTGGTCTCGGCGGTCTCCTTGAG 814229 Query 7780 TTTGGTAAGAACCATCGATGAAATCTC 7806 |||| ||| ||||| || || ||||| Sbjct 814228 CTTGGAAAGGACCATGGACGAGATCTC 814202 Score = 107 bits (118), Expect = 2e-18 Identities = 116/153 (76%), Gaps = 3/153 (2%) Strand=Plus/Minus Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052 ||| |||| ||| || || ||||| || | | | || || |||||||| || ||||| Sbjct 813947 CTTGGCCGAGTCACCAATGAGACGCTCGGTCT---CGGTGAAGGCGACGTAAGAAGGGGT 813891 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112 || || || || |||||||| || || || || || ||||||||||||||||| ||||| Sbjct 813890 GGTGCGGTTACCCTGGTCGTTGGCGATGATCTCGACTCGGTCGTTTTGCCAGACACCGAC 813831 Query 8113 GCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 ||| || || || ||||| | ||| ||||| || Sbjct 813830 GCAGGAGTAGGTGGTTCCAAGATCGATACCTAT 813798 >seq31 Length=1942871 Score = 156 bits (172), Expect = 5e-33 Identities = 231/327 (71%), Gaps = 3/327 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || ||||| || ||| ||||||| ||| Sbjct 70649 TCGAAGTCCTCACCACCCAAGTGGGTGTCACCGGCGGTGGCCAAGACCTCAAAGACACCG 70590 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 |||| || | | ||| ||||| ||||| || || || || || | | || | | Sbjct 70589 TCTTCGATCGAGAGGAGCGAGACATCGAACGTTCCTCCTCCGAGATCGTAGACGATGATG 70530 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | | | |||| ||||||||||| ||||| || || || || || || Sbjct 70529 TTGCGCTCGCCACC---GGTCTTGTCGAGACCGTAGGCGATCGCGGCGGCAGTGGGCTCG 70473 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | | || ||| |||||| || || || || | || || || |||||||||||| Sbjct 70472 TTGACGACTCGGAGAACGTTCAGACCGGCGATCGTGCCAGCGTCCTTGGTCGCTTGTCGT 70413 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || | ||||| |||||||||||||| || ||||| |||| ||||| ||||| || | Sbjct 70412 TGAGCGTCGTTGAAGTAGGCCGGGACGGTGACGACGGCGTGGGTGACCTTCTTGCCCAAG 70353 Query 7757 TACGATTCCGCGATATCTTTCATTTTG 7783 || | || ||| | || ||||| ||| Sbjct 70352 TAGGCCTCGGCGGTCTCCTTCATCTTG 70326 Score = 100 bits (110), Expect = 4e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 7601 TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGG 7660 |||||||||||||||| || || || || || || || || | ||| || || || Sbjct 1623472 TCGAGACCGTACGCGAGGGCAGCGGCGGTGGGCTCGTTGATGACACGGAGCACGTCAAGA 1623531 Query 7661 CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGG 7720 || || || || | || || || ||||| ||||| ||||| ||||| |||||||| ||| Sbjct 1623532 CCCGCGATCGTACCGGCGTCCTTGGTCGCCTGTCGCTGCGAGTCGTTGAAGTAGGCGGGG 1623591 Query 7721 ACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATT 7780 || || ||||| |||| | |||| ||| ||||| || || ||| | || ||||| Sbjct 1623592 ACAGTGACGACGGCGTGCTTGACCGGCTTTCCGAGGTAGCCCTCGGCGGTCTCCTTCATC 1623651 Query 7781 TTG 7783 ||| Sbjct 1623652 TTG 1623654 >seq29 Length=1745553 Score = 86.0 bits (94), Expect = 8e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22585 TACGGTATGTTTGCATGCAATGGTATAATGTTCAACCACGAATCACCGAGACGGGGTGAA 22644 |||| ||||| || ||||| ||||| ||||||||||||| || ||| | || ||| Sbjct 71383 TACGATATGTACGCGTGCAACGGTATCTTGTTCAACCACGAGTCCCCGCGTCGTGGTCGC 71442 Query 22645 AACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAATATCAGTGCAGGTAAACAAAAA 22704 | ||| || ||| | || || | | | |||||| | ||| ||| |||| | Sbjct 71443 ACCTTTGTCACAAGGAAGATCTCCCGAGCTGTCGCCGAGATCTCGCTCGGTCAACAGGAC 71502 Query 22705 TGTTTATACCTTGGTAACCTAGATGCGAAACGAGATTGGGGTCATGCACGCGATTACGTG 22764 || | ||||| || || | || || || || |||||||| || || |||| ||||| Sbjct 71503 TGCCTCTACCTCGGCAATATGGAGGCCAAGCGTGATTGGGGACACGCGTGCGACTACGTC 71562 Query 22765 AAATGTATGTGGAAAATATTACAACAAGATAAACCGGAAGATTTTGT 22811 | ||||||||| || | || ||||| || || || || ||||| Sbjct 71563 GAGGGTATGTGGAGGATGCTGCAGCAAGACAAGCCTGACGACTTTGT 71609 >seq24 Length=1725410 Score = 84.2 bits (92), Expect = 3e-11 Identities = 220/334 (66%), Gaps = 4/334 (1%) Strand=Plus/Minus Query 184049 ATAAGTCCCTTGATATGACTTCCATCGTTATCTGCATCGGTCATGATCATGAGTCTTCCG 184108 || || ||||||||||| |||||||| |||| ||||| |||||||||||| | ||| Sbjct 581787 ATCAGACCCTTGATATGCGATCCATCGTGATCTTGATCGGCCATGATCATGAGCTTGCCG 581728 Query 184109 TATCTGAGTTCGGAGAGTGATGTATACACTTTCCCTTGCTGAAGCCCCAAAATCTTTTTA 184168 || | ||| | || || || ||||| || ||||| || ||||| |||| || Sbjct 581727 TAACGGAGCGAGTCGACGTCGGTGTAAACTTTGCCCTGCTGCAGACCCAAGATCTGCTTG 581668 Query 184169 AGATCATTAAACTCCTTGTTTTCGGTAAGTTGTTTTACACTCGCGTCACGCACGTTCTTA 184228 | | | || ||| || ||| || ||| | ||| ||||||||||| Sbjct 581667 ATCGCTTGAATCTCGGCATTGTCGAGGAGGGCTTTGCCCGCCGCTTCACGCACGTTGAGC 581608 Query 184229 CATTTACCCCTAAGCGGAAAAACACCGTAATGATCACGACCAACAACTGAAAGACCAGCA 184288 | || || | | || || ||||| || | || ||||| || || | ||||| | Sbjct 581607 AACTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCGACGACAGCCAGACCCGAG 581548 Query 184289 ATTGCAAGTGTTTTTGCAGAATCACCTTCGGTAATAATAAGAGTACACTT--ACCAGAGT 184346 | || || | || || ||||| |||||||| | || || || ||||| ||| || Sbjct 581547 ACGGCGAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGCGTGCACTTGGACC--CGT 581490 Query 184347 GTGTGGTACCGGCTTTATTGGCATCGTCGAGTTT 184380 | ||||| || || || ||||| ||||| || Sbjct 581489 TCCTCGTACCAGCGTTGTTCGCATCTTCGAGCTT 581456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132315711240