Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12-
23] 61 sequences; 27,876,544 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq47 165 2e-35
seq24 154 3e-32
seq10 141 2e-28
>seq47
Length=1359276
Score = 165 bits (182), Expect = 2e-35
Identities = 159/204 (78%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || ||||| || || |||||||||||||| || || | ||||| || |||||
Sbjct 568136 GTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCATCCTCAAGCTG 568077
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| || |||||||||||||| |||||||| || ||||| ||||| ||
Sbjct 568076 CTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTT 568017
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| ||||| |||||||| || || || || || | |||||| || ||
Sbjct 568016 GGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGT 567957
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
|| || || ||||| | ||||||
Sbjct 567956 CAGGGTCTTGACGAAGATTTGCAT 567933
Score = 161 bits (178), Expect = 2e-34
Identities = 158/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || ||||| || || || ||||||||||| || || | ||||| ||||||||
Sbjct 821915 GTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTG 821856
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || || ||||| || |||||||||||||| |||||||| || |||||||| || ||
Sbjct 821855 CTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTT 821796
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| ||||| |||||||| || || || || || | |||||| || ||
Sbjct 821795 GGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGT 821736
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
|| || || ||||| | ||||||
Sbjct 821735 CAGGGTCTTGACGAAGATTTGCAT 821712
Score = 152 bits (168), Expect = 1e-31
Identities = 156/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || ||||| || || || ||||||||||| || || | ||||| ||||||||
Sbjct 567680 GTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTG 567621
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| | ||| || |||||||| |||||||| || ||||| ||||| ||
Sbjct 567620 CTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTT 567561
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| || || |||||||| || || || || || | |||||| || ||
Sbjct 567560 GGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGT 567501
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
|| || || ||||| | ||||||
Sbjct 567500 CAGGGTCTTGACGAAGATTTGCAT 567477
Score = 152 bits (168), Expect = 1e-31
Identities = 156/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || ||||| || || || ||||||||||| || || | ||||| ||||||||
Sbjct 821459 GTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGACCATCCTCGAGCTG 821400
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| || |||||||||||||| ||||| || || ||||| || || ||
Sbjct 821399 CTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTT 821340
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|||||||| ||||| |||||||| || || || || || | |||||| || ||
Sbjct 821339 GGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGT 821280
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
|| || || ||||| | ||||||
Sbjct 821279 CAGGGTCTTGACGAAGATTTGCAT 821256
Score = 143 bits (158), Expect = 6e-29
Identities = 154/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || ||||| || || |||||||| ||||| || || | ||||| ||||||||
Sbjct 821687 GTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTG 821628
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || || ||||| | ||| ||||||||||| ||||| || || ||||| || || ||
Sbjct 821627 CTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTT 821568
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|||||||| ||||| |||||||| || || || || || | |||||| || ||
Sbjct 821567 GGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGT 821508
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
|| || || ||||| | ||||||
Sbjct 821507 CAGGGTCTTGACGAAGATTTGCAT 821484
Score = 138 bits (152), Expect = 3e-27
Identities = 153/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || ||||| || || |||||||| ||||| || || | ||||| ||||||||
Sbjct 567908 GTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTG 567849
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || || ||||| | ||| ||||||||||| ||||| || || ||||| || || ||
Sbjct 567848 CTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTT 567789
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|||||||| ||||| |||||||| || || || || || | |||||| || ||
Sbjct 567788 GGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGT 567729
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
|| || || ||||| | |||||
Sbjct 567728 CAGGGTCTTGACGAAGATCTGCAT 567705
Score = 138 bits (152), Expect = 3e-27
Identities = 153/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || ||||| || || || ||||| ||||| || || | ||||| ||||||||
Sbjct 822143 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTG 822084
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || || ||||| | ||| ||||||||||| ||||| || || ||||| || || ||
Sbjct 822083 CTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTT 822024
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|||||||| ||||| |||||||| || || || || || | |||||| || ||
Sbjct 822023 GGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGT 821964
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
|| || || ||||| | ||||||
Sbjct 821963 CAGGGTCTTGACGAAGATTTGCAT 821940
>seq24
Length=1725410
Score = 154 bits (170), Expect = 3e-32
Identities = 156/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || ||||| |||||||| ||||||||||| ||||| | ||||| ||||||||
Sbjct 1413394 GTGGAGGGTCGACTCCTTTTGAATGTTGTAATCGGCGAGAGTGCGGCCATCCTCGAGCTG 1413453
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| || ||||| |||||||| || |||||||| |||||||| || ||
Sbjct 1413454 CTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTT 1413513
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| || || ||||| || || || || ||||| | ||||| || ||
Sbjct 1413514 GGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGT 1413573
Query 195117 CAAAGTTTTTACGAACACTTGCA 195139
| || || || || | |||||
Sbjct 1413574 GAGGGTCTTGACAAAGATTTGCA 1413596
>seq10
Length=1963216
Score = 141 bits (156), Expect = 2e-28
Identities = 152/201 (76%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|| || || ||||| ||||| || ||||| ||||| | || | ||||| |||||||||
Sbjct 1805586 TGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCGAGCTGC 1805645
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
|| || |||||||| || ||||| |||||||| || |||||||| |||||||| || ||
Sbjct 1805646 TTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTTG 1805705
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
||||||||| || || ||||| || || || || ||||| | |||||| || ||
Sbjct 1805706 GTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTA 1805765
Query 195118 AAAGTTTTTACGAACACTTGC 195138
| ||| || || || | ||||
Sbjct 1805766 AGAGTCTTGACAAAGATTTGC 1805786
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109480732870787
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |