Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12- 23] 61 sequences; 27,876,544 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq47 165 2e-35 seq24 154 3e-32 seq10 141 2e-28 >seq47 Length=1359276 Score = 165 bits (182), Expect = 2e-35 Identities = 159/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| || || |||||||||||||| || || | ||||| || ||||| Sbjct 568136 GTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCATCCTCAAGCTG 568077 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| || |||||||||||||| |||||||| || ||||| ||||| || Sbjct 568076 CTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTT 568017 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||||| ||||| |||||||| || || || || || | |||||| || || Sbjct 568016 GGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGT 567957 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || || || ||||| | |||||| Sbjct 567956 CAGGGTCTTGACGAAGATTTGCAT 567933 Score = 161 bits (178), Expect = 2e-34 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| || || || ||||||||||| || || | ||||| |||||||| Sbjct 821915 GTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTG 821856 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| || |||||||||||||| |||||||| || |||||||| || || Sbjct 821855 CTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTT 821796 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||||| ||||| |||||||| || || || || || | |||||| || || Sbjct 821795 GGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGT 821736 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || || || ||||| | |||||| Sbjct 821735 CAGGGTCTTGACGAAGATTTGCAT 821712 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| || || || ||||||||||| || || | ||||| |||||||| Sbjct 567680 GTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTG 567621 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| | ||| || |||||||| |||||||| || ||||| ||||| || Sbjct 567620 CTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTT 567561 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||||| || || |||||||| || || || || || | |||||| || || Sbjct 567560 GGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGT 567501 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || || || ||||| | |||||| Sbjct 567500 CAGGGTCTTGACGAAGATTTGCAT 567477 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| || || || ||||||||||| || || | ||||| |||||||| Sbjct 821459 GTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGACCATCCTCGAGCTG 821400 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| || |||||||||||||| ||||| || || ||||| || || || Sbjct 821399 CTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTT 821340 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||||| ||||| |||||||| || || || || || | |||||| || || Sbjct 821339 GGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGT 821280 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || || || ||||| | |||||| Sbjct 821279 CAGGGTCTTGACGAAGATTTGCAT 821256 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| || || |||||||| ||||| || || | ||||| |||||||| Sbjct 821687 GTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTG 821628 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| | ||| ||||||||||| ||||| || || ||||| || || || Sbjct 821627 CTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTT 821568 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||||| ||||| |||||||| || || || || || | |||||| || || Sbjct 821567 GGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGT 821508 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || || || ||||| | |||||| Sbjct 821507 CAGGGTCTTGACGAAGATTTGCAT 821484 Score = 138 bits (152), Expect = 3e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| || || |||||||| ||||| || || | ||||| |||||||| Sbjct 567908 GTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTG 567849 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| | ||| ||||||||||| ||||| || || ||||| || || || Sbjct 567848 CTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTT 567789 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||||| ||||| |||||||| || || || || || | |||||| || || Sbjct 567788 GGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGT 567729 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || || || ||||| | ||||| Sbjct 567728 CAGGGTCTTGACGAAGATCTGCAT 567705 Score = 138 bits (152), Expect = 3e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| || || || ||||| ||||| || || | ||||| |||||||| Sbjct 822143 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTG 822084 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| | ||| ||||||||||| ||||| || || ||||| || || || Sbjct 822083 CTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTT 822024 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||||| ||||| |||||||| || || || || || | |||||| || || Sbjct 822023 GGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGT 821964 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || || || ||||| | |||||| Sbjct 821963 CAGGGTCTTGACGAAGATTTGCAT 821940 >seq24 Length=1725410 Score = 154 bits (170), Expect = 3e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| |||||||| ||||||||||| ||||| | ||||| |||||||| Sbjct 1413394 GTGGAGGGTCGACTCCTTTTGAATGTTGTAATCGGCGAGAGTGCGGCCATCCTCGAGCTG 1413453 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| || ||||| |||||||| || |||||||| |||||||| || || Sbjct 1413454 CTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTT 1413513 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||||| || || ||||| || || || || ||||| | ||||| || || Sbjct 1413514 GGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGT 1413573 Query 195117 CAAAGTTTTTACGAACACTTGCA 195139 | || || || || | ||||| Sbjct 1413574 GAGGGTCTTGACAAAGATTTGCA 1413596 >seq10 Length=1963216 Score = 141 bits (156), Expect = 2e-28 Identities = 152/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || || ||||| ||||| || ||||| ||||| | || | ||||| ||||||||| Sbjct 1805586 TGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCGAGCTGC 1805645 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || |||||||| || ||||| |||||||| || |||||||| |||||||| || || Sbjct 1805646 TTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTTG 1805705 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||||||||| || || ||||| || || || || ||||| | |||||| || || Sbjct 1805706 GTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTA 1805765 Query 195118 AAAGTTTTTACGAACACTTGC 195138 | ||| || || || | |||| Sbjct 1805766 AGAGTCTTGACAAAGATTTGC 1805786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109480732870787