Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12-
23] 61 sequences; 27,876,544 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq28 159 6e-34
seq24 105 1e-17
>seq28
Length=749551
Score = 159 bits (176), Expect = 6e-34
Identities = 778/1229 (63%), Gaps = 28/1229 (2%)
Strand=Plus/Minus
Query 213192 GCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251
|||| ||||| |||| || | || |||| ||||||||| || || || | | |||||
Sbjct 4558 GCCATGTCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTG 4499
Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311
||||| ||||| || || ||| |||||| || | |||| | || || ||
Sbjct 4498 AGCTTGCGCGCCTCGGGCGAATCGAACGGCATCGCCAAGGCCATGAACGCGTCGGCTAGA 4439
Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAA 213370
|| || || |||||||||||||| | ||| | | ||| || || | || ||| |
Sbjct 4438 CCTTGCACTCCGATGCCGATGGGGCGGTGACGGAAGTTGGAGTTCTGCGC-CTCGATGAC 4380
Query 213371 GGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATG 213430
||| || ||||| ||||||||| ||| | |||| | | | || ||| ||| |
Sbjct 4379 GGGATAGTAGTTGACGTCGATGATGCGGTTCAAGTTGAAAGCGACAACCTTGACGACCTC 4320
Query 213431 GGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAA-CTCAGGCAGGGCGA 213489
| || | || | || |||| | |||| || | || ||| |||| ||||
Sbjct 4319 GTGCAACTTCT------TAAAGTCGTACACGCCGTTCTTGATGAAGCTC-GGCAACGCGA 4267
Query 213490 TGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGC 213549
| ||||| |||||| ||||| ||| | | | | |||||| |||||||||||||
Sbjct 4266 TCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCGGTGC 4207
Query 213550 ACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAAT 213609
||| || | ||| ||||| ||||||| ||||| || || ||| || | |
Sbjct 4206 ACAAATTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCGGCGT 4147
Query 213610 CCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGA 213669
|||||||||||||| ||||| || || || | ||||| | | || || | ||| |
Sbjct 4146 CCTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTACCAAA 4087
Query 213670 GGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGA 213729
| | || || | | | || | || | | ||||| | ||| | |
Sbjct 4086 GCTTTTGCGCGGGGATCGTCTTCTTGGCGCGACCCTCCTTT---TCGTATTTCTCGAACA 4030
Query 213730 GCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGAT---GCGGGACACA 213786
| ||||| || | ||| |||| || || || || || | ||||| || |
Sbjct 4029 AGGCCTTGAACTCTTCGCCATAGACTTCGTGGAGACCGGG---GGCTTCGGCGGGGCAGA 3973
Query 213787 TGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCG 213846
|||| |||||| ||| | | ||| | || |||||| || || || | ||| ||||
Sbjct 3972 AGAGGGGCCAGTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCG 3913
Query 213847 CGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAA 213906
| || || || | | | || ||| || ||| ||||| || || || |
Sbjct 3912 CCAAAAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGA 3853
Query 213907 AGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCT 213963
| || |||| ||| |||||||||||||| | |||||| || ||||| || | || | |
Sbjct 3852 ACTCGAAGACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGT 3793
Query 213964 TGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCC 214023
|||| || ||||| || | || | ||| ||| || || | ||| || | |
Sbjct 3792 TGCCACCTTGGTCGACGTAGCGCGCGGTGTTATTGTAGACACGGAGCATGGGGACGATGC 3733
Query 214024 CGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGG 214083
|||| || | ||||| || || || || || ||||||| || | | |||| |||
Sbjct 3732 CGTTCGAGTAGCCGTTCGTGCCGGCAATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGC 3673
Query 214084 AGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGA 214143
| || || ||||||||| ||||||||| | ||||| | | | || || ||
Sbjct 3672 TCAAACCGATACCACCGGCGGTCTTGGAGATGAGAGCGCACGTCTTGAGCGTGTCGTAGA 3613
Query 214144 TGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGG 214203
|||| | || ||||| | | | | |||||| || ||| ||||| || |
Sbjct 3612 TGCCTTCGATCGAATCATCCTTCATCGTGACCAAGAAACACGACGAAAGCTGCGGGTGAG 3553
Query 214204 ACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCC 214263
|| || | |||||| ||||| || ||| ||| | | || | || | |||
Sbjct 3552 GCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTACCGCTCGGACATGAGGT 3493
Query 214264 TGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCA 214323
|||| | || || ||| |||||||||| ||| || | ||| | ||| |
Sbjct 3492 TGTACGACTGCAAGACGCGCTCGATGTCGTGCCCGTGAATGCCGACGGCGACACGCATGA 3433
Query 214324 GCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCCCTTG---AGCAGGTAGGAGCGCT 214380
|||||||||| || | || || | ||| | | || |||| |||||||||||
Sbjct 3432 GCATGTGCTGCGGGCGTTC---GGCGACCTTGCCGTCAATGCGAAGCAAGTAGGAGCGCT 3376
Query 214381 CCAGAGTCTTGAACCCAAAGTAGGAGTAG 214409
| || || ||||| ||||||||| ||||
Sbjct 3375 CGAGCGTTTTGAAGCCAAAGTAGTTGTAG 3347
>seq24
Length=1725410
Score = 105 bits (116), Expect = 1e-17
Identities = 164/234 (70%), Gaps = 3/234 (1%)
Strand=Plus/Plus
Query 48454 GATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTC 48513
|||||| || || || ||| ||| ||||| | |||||| || | ||||| |||||
Sbjct 331573 GATCTGAAAGCCATAAAAGCACCTCGCCTCGGCGAACTGCACCTCACTTGAGAACCTCTC 331632
Query 48514 CAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAG 48573
| || |||||||| || | |||||||||||| || |||||||| || || || |
Sbjct 331633 AACCAAGTTCTCATTCACGACCCCATCTGAAGCGGCGAAGAAGGCGAGCACGTGGGCGAT 331692
Query 48574 GAAATGGCGCTCGTTGTGGGTGAG---AGCATTCCAGCCCTGTACGTCTTTGCCCAGGTC 48630
|| | ||| |||| || | |||| | |||| | || | ||| |||| |||||
Sbjct 331693 AAAGTAGCGTTCGTCGTTGTTGAGCTTGTGGTGCCAGTCGTGGAGGTCGCTGCCGAGGTC 331752
Query 48631 CACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684
| ||||| | | ||| |||||||| | |||| |||||||||| |||| ||
Sbjct 331753 GATCTCTTCGGCGGACCAAAAGGACGCTTGGGCTTGTTTGTACATGGCCCAAAT 331806
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931532089706240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |