Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12- 23] 61 sequences; 27,876,544 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq28 259 9e-64 seq16 86.0 1e-11 >seq28 Length=749551 Score = 259 bits (286), Expect = 9e-64 Identities = 797/1218 (65%), Gaps = 45/1218 (4%) Strand=Plus/Minus Query 221423 GCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG---GCCTCGGGAGAA 221479 || ||||||||||||||||| ||||| ||||||||| |||| |||||||| ||| Sbjct 4534 GCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTGAG---CTTGCGCGCCTCGGGCGAA 4478 Query 221480 GTGAAGGGCATACGC--AGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGA 221537 ||| ||||| ||| || |||| | ||||||| || || || |||||||| |||| Sbjct 4477 TCGAACGGCAT-CGCCAAGGCCATGAACG-CGTCGGCTAGACCTTGCACTCCGATGCCGA 4420 Query 221538 TGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGA 221597 |||| | ||| | |||||| ||| || |||||||| |||||||||||| Sbjct 4419 TGGGGCGGTGACGGAAGTTGGAGTTCTGCGCCTCGATGACGGGATAGTAGTTGACGTCGA 4360 Query 221598 TCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGA 221657 | | ||| | ||| | || || || || || |||||| || ||||| | | Sbjct 4359 TGATGCGGTTCAAGTTGAAAGCGACAACCTTGACGACCTCGTGCAACTTCT------TAA 4306 Query 221658 ACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCA 221717 | | || ||||| || || | | || ||| ||| | || ||||| Sbjct 4305 AGTCGTACACGCCGT--TCTTGATGAAGCTCGGCAAC-GCGAT--------CGA-GGCCA 4258 Query 221718 GGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGC 221777 ||| || ||||| ||||||| | |||| |||||||| || || | || Sbjct 4257 AGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCGGTGCACAAATTCG 4198 Query 221778 TGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGA 221837 ||||||| || || |||| || || || || || || || ||||||||||||| Sbjct 4197 ACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCGGCGTCCTTGTAGA 4138 Query 221838 GCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGG 221897 |||| ||||| |||||| || | ||| ||| | ||||| || ||| || | | | Sbjct 4137 GCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTACCAAAGCTTTTGCG 4078 Query 221898 CGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCA- 221956 || | |||| ||||| | |||||| |||||| || | | || || | | Sbjct 4077 CGGGGATCGTCTTCTTGGCGCGACCCTC---CTTTTCGTATT---TCTCGAACAAGGCCT 4024 Query 221957 --AACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCC 222014 |||| ||| || || | |||| || || || |||||| || | || || Sbjct 4023 TGAACTCTTCGCCATAGACTTCGTGGAGACCGGGGGCTTCGGCGGGGCAGAAGAGGGGCC 3964 Query 222015 AGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGA 222074 ||| | | | | ||| | || ||||||||| || || ||||| |||||| ||||| Sbjct 3963 AGTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGCCAAAAAGA 3904 Query 222075 GATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAA 222134 |||| | | || |||||| ||||| ||| || | || |||| ||||| || | Sbjct 3903 GATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGA 3844 Query 222135 TGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCT 222194 |||||||||||||||||| || |||| || | || ||||| |||||||||||||| | Sbjct 3843 CGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTT 3784 Query 222195 GATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATC 222254 | || || | | | ||| ||| || || | || || | ||||| || Sbjct 3783 GGTCGACGTAGCGCGCGGTGTTATTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGT 3724 Query 222255 GACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG-ACATGCCG 222313 ||||| ||||| |||||| | ||| || | | ||| ||| | || ||| Sbjct 3723 AGCCGTTCGTGCCGGCAATGTAGGAGCCGGTCGCGCGGATGTT-GTGGATGCTCAAACCG 3665 Query 222314 ATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCC 222373 |||||||||||| || ||||| | ||||| ||||||| ||||| |||||| || Sbjct 3664 ATACCACCGGCGGTCTTGGAGATGAGAGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCG 3605 Query 222374 ATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAG 222433 || || || ||||| | | | || ||||| ||||| | ||| | | | | | | Sbjct 3604 ATCGAATCATCCTTCATCGTGACCAAGAAACACGACGAAAGCTGCGGGTGAGGCGTTCCG 3545 Query 222434 GCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTC 222493 ||||| || ||||| || |||||| |||||||| | | ||||| || | ||||| | Sbjct 3544 GCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTACCGCTCGGACATGAGGTTGTACGAC 3485 Query 222494 TCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTAC 222553 | | ||| | |||||| || ||||||||| | |||| | |||| ||||| | Sbjct 3484 TGCAAGACGCGCTCGATGTCGTGCCCGTGAATGCCGACGGCGACACGCATGAGCATGTGC 3425 Query 222554 TGGGGCCTCTCCACAGGACCCTTGGAG---CTGGAGAGCAGGTACGATTTTTCCAGAGTC 222610 || || | || | || ||||| | || |||| ||| || || || || Sbjct 3424 TGCGGGCGTTCGGC--GA-CCTTGCCGTCAATGCGAAGCAAGTAGGAGCGCTCGAGCGTT 3368 Query 222611 TTGAACCCAAAGTAGTTG 222628 ||||| |||||||||||| Sbjct 3367 TTGAAGCCAAAGTAGTTG 3350 >seq16 Length=975364 Score = 86.0 bits (94), Expect = 1e-11 Identities = 139/199 (70%), Gaps = 7/199 (4%) Strand=Plus/Plus Query 25513 TGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTAC-----GCTCTAT 25567 ||||||||||||||||| || || ||||||||||| ||| |||| || |||| | Sbjct 134296 TGGACCGCCGAAGAGATGGACTTGTCCAAGGACATGCACGACTGGGACAACAAGCTCAAG 134355 Query 25568 CCAAAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTA 25627 || ||||||| | || || | |||| | || || || || ||||| || || | Sbjct 134356 CC--CGACGAGCGCTACTTCATCTCGCACGTCCTCGCCTTTTTCGCCGCCTCCGACGGCA 134413 Query 25628 TAGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGT 25687 | || |||||||| || |||| ||||| | | || || |||| | ||||| | Sbjct 134414 TCGTCAACGAGAACTTGGTCGAGCGATTCTCTGGTGAGGTCCAGTCAGCCGAGGCTCGAT 134473 Query 25688 GTTTCTACGGTTTCCAGAT 25706 | ||||||||||| || || Sbjct 134474 GCTTCTACGGTTTTCAAAT 134492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844091755840