Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12- 23] 61 sequences; 27,876,544 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq28 174 2e-38 seq29 120 4e-22 seq16 109 7e-19 seq24 84.2 3e-11 >seq28 Length=749551 Score = 174 bits (192), Expect = 2e-38 Identities = 556/857 (65%), Gaps = 13/857 (2%) Strand=Plus/Plus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| ||| ||||| ||||||| ||||| ||||||| |||||| | ||||| || || Sbjct 3419 CCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATTCACGGGCACGACATCGAGCGCGT 3478 Query 75271 CTTGGAGACATACGACAAGATGTCCCAA-GGTATGTTCATTCACGCAACACCAACCCTCT 75329 |||| || | ||| || |||||| | |||| || | ||||| | || || |||| Sbjct 3479 CTTGCAGTCGTACAACCTCATGTCCGAGCGGTACTTT-ACCCACGCCTCGCCGACGCTCT 3537 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 |||| || || || || |||||| | || || ||| | || | | ||||| | Sbjct 3538 TCAACGCCGGAACGCCTCACCCGCAGCTTTCGTCGTGTTTCTTGGTCACGATGAAGGATG 3597 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 | || ||| | || ||||| | || || | | ||| || | ||||| ||| || | Sbjct 3598 ATTCGATCGAAGGCATCTACGACACGCTCAAGACGTGCGCTCTCATCTCCAAGACCGCCG 3657 Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509 | ||||| || || |||||| | | | || | || ||| || || | Sbjct 3658 GTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCCTACATTGCCGGCACGA 3717 Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569 | || | || | || || | || ||||| || || | || ||| |||||||| | Sbjct 3718 ACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAATAACACCGCGCGCTACG 3777 Query 75570 TAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGC 75623 | | |||| || ||||| | || || ||||| ||||| | || || |||| Sbjct 3778 TCGACCAAGGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCGTGGC 3834 Query 75624 ATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGT 75683 | || || || | |||||||| || | || ||||| || | || || | || Sbjct 3835 ACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGCG 3894 Query 75684 GTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743 | | |||||||||| | || |||||||| || || |||||| |||| || |||| | Sbjct 3895 CTCGTGATCTCTTTTTGGCGCTCTGGATTCCCGATCTCTTCATGGAGCGTGTCGAGGCCG 3954 Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTG 75803 || | ||| | || ||||| || | | | || || |||||| ||| | || | Sbjct 3955 CCGGCGACTGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGTCTCCACGAAGTCTATGGCG 4014 Query 75804 AGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTAC 75863 | ||||| | ||| | | | || || ||| |||||||| | ||||| ||| | | Sbjct 4015 AAGAGTTCAAGGCCTTGTTCGAGAAATACGAAAAGGAGGGTCGCGCCAAGAAGACGATCC 4074 Query 75864 CAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATAT 75922 | || || | | ||||| | || |||||| | | ||| || ||||| | || | Sbjct 4075 CCGC-GCAAAAGCTTTGGTACGCAATTCTCGAGGCCCAGGTCGAAACTGGCAACCCCTTC 4133 Query 75923 ATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAG 75982 ||||| |||||||| || |||||||| ||||||||||| | || || |||||| Sbjct 4134 ATGCTCTACAAGGACGCCGCAAACAAGAAATCGAACCAAAAGAACCTTGGCACGATCAAG 4193 Query 75983 AGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGC 76042 || ||| | ||||| || || | |||||| | | ||| ||| || || ||| Sbjct 4194 TCGTCGAATTTGTGCACCGAGATCATCGAGTACTCGGCGCCGGACGAGTGCGCCGTCTGC 4253 Query 76043 AATTTGGCATCAATCGC 76059 || ||||| || ||||| Sbjct 4254 AACTTGGCCTCGATCGC 4270 >seq29 Length=1745553 Score = 120 bits (132), Expect = 4e-22 Identities = 273/408 (67%), Gaps = 2/408 (0%) Strand=Plus/Minus Query 177559 TCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCTCT 177618 || || |||| | | || | ||| ||||| |||||||||| ||| | || |||| || Sbjct 71651 TCGACGAACTCCTTGACGGGGTGGGTCTCACCCGTCGCGAGGACAAAGTCGTCAGGCTTG 71592 Query 177619 TCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTG 177678 ||||| || ||||| |||||| | || || ||||| || || ||||| || | Sbjct 71591 TCTTGCTGCAGCATCCTCCACATACCCTCGACGTAGTCGCACGCGTGTCCCCAATCACGC 71532 Query 177679 GCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACAATTTGTTTGACG 177738 || | | || ||||| | ||| | || | ||| | || | ||| Sbjct 71531 TTGGCCTCCATATTGCCGAGGTAGAGGCAGTCCTGTTGACCGAGCGAGATCTCGGCGACA 71472 Query 177739 CCATCAGTA-ATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAA 177797 | || | | |||||| ||||||||||| | ||| || | ||| || ||||||||||| Sbjct 71471 GC-TCGGGAGATCTTCCTTGTGACAAAGGTGCGACCACGACGCGGGGACTCGTGGTTGAA 71413 Query 177798 GAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTG 177857 | ||| ||| ||| || |||||| | || | || ||||| |||||||||| |||| Sbjct 71412 CAAGATACCGTTGCACGCGTACATATCGTACGCCTCGCGGTAGTTTTTGACGATCCAGAA 71353 Query 177858 AGCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTG 177917 ||| ||| |||| ||| || || || || |||| |||||| ||| ||| | ||| Sbjct 71352 GGCGTACAACTTGGCGACTCCGTATGGCGAACGAGGGTGGAAGGGCGTCGTCTCGGATTG 71293 Query 177918 TGGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 || | | | | || || ||| ||| ||||| ||||||||||| Sbjct 71292 AGGGATCTGGACGGCCTTGCCGTACAACTCGGAAGTCGAGGCTTGGTA 71245 >seq16 Length=975364 Score = 109 bits (120), Expect = 7e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 177748 ATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCG 177807 ||||| | ||||| ||| | || || | || || ||||||||||||||||| ||| Sbjct 316663 ATCTTTCTCGTGACGAAGGTGCGGCCACGGCGGGGGGACTCGTGGTTGAAGAGGATACCG 316722 Query 177808 GAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAAT 177867 ||| || ||||| | || || || ||||| || ||||||| |||| ||| ||| Sbjct 316723 TTGCACGCGTACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAAC 316782 Query 177868 TTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTCT 177927 |||| ||| || ||| || || ||||||||||| ||| ||| | || || || || Sbjct 316783 TTGGCGACTCCGTAGGGCGAACGAGGGTAGAAGGGGGTCGTCTCGGACTGAGGGGTCTCG 316842 Query 177928 CGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 ||| || || ||| |||||| || ||||| ||||| Sbjct 316843 ACGACCTTGCCGTACAACTCCGAGGTCGAGGCCTGGTA 316880 >seq24 Length=1725410 Score = 84.2 bits (92), Expect = 3e-11 Identities = 227/340 (67%), Gaps = 12/340 (4%) Strand=Plus/Plus Query 13561 CAAGTTGGATGACGCGAACAAGGCGGGTACGGCACAATCTGGA--AAGTGTACTCTCATT 13618 |||| | || || |||||||| || |||||| | | | || ||||| || ||||| Sbjct 581455 CAAGCTCGAAGATGCGAACAACGCTGGTACG--AGGAACGGGTCCAAGTGCACGCTCATC 581512 Query 13619 GTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCTCTGTCGTTGGTCGT 13678 | || || || ||||| || || | ||||| || ||||||| ||||||| ||||| Sbjct 581513 TTGACCGAAGGAGATTCCGCCAAGGCGCTCGCCGTCTCGGGTCTGGCTGTCGTCGGTCGA 581572 Query 13679 GATCACTACGGTGTGTTCCCACTTCGCGGTAAATGTAAGAATGTTCGGGACGCTTCGGTG 13738 || |||| ||||| ||||| | || || || | || || || || || ||| Sbjct 581573 GACAACTATGGTGTCTTCCCTTTGCGAGGAAAGTTGCTCAACGTGCGTGAAGCGGCGG-- 581630 Query 13739 GCACAGCTCACATCAAACCAG--GAG-TTCAA-CGATCTCAAGAAGATCCTTGGTCTTCA 13794 ||| ||| | | || | | ||| ||||| ||||| ||| ||||| | ||||| || Sbjct 581631 GCAAAGCCCTCCTCGACAATGCCGAGATTCAAGCGATC--AAGCAGATCTTGGGTCTGCA 581688 Query 13795 ACAAGGAAAAGACTACCAAGATGTTTCTGAACTTCGCTATGGTCGTCTTATGATTATGAC 13854 || || |||| ||| || || || || || || || ||||| ||| | Sbjct 581689 GCAGGGCAAAGTTTACACCGACGTCGACTCGCTCCGTTACGGCAAGCTCATGATCATGGC 581748 Query 13855 AGATGCCGATAATGATGGTTCTCACATCAAGGGTCTCATC 13894 ||| ||| | ||||| || || ||||||||||| ||| Sbjct 581749 CGATCAAGATCACGATGGATCGCATATCAAGGGTCTGATC 581788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569145115680