Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12- 23] 61 sequences; 27,876,544 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq47 100 8e-16 seq44 86.0 2e-11 >seq47 Length=1359276 Score = 100 bits (110), Expect = 8e-16 Identities = 128/172 (74%), Gaps = 12/172 (7%) Strand=Plus/Plus Query 251486 CACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAG 251545 |||| || || ||||| ||||||||||||||||| |||||||||||||||||||| || | Sbjct 1315461 CACCATGAGAGATCATGCAATCACGCTCCATTTCTCCGAAACGAAGACCACCATCACGCG 1315520 Query 251546 CCCTACCCTCGGCAGGCTGACGAGT-GAGAT-TAACCATAGGACC----GATGGAGCGGC 251599 | |||||| |||| || || || |||| | | | |||||| | | ||| | Sbjct 1315521 ATCGACCCTCCACAGGTTGTCGGGTCAAGATCTGA--AGAGGACCGCGAGCTCGAGAGTG 1315578 Query 251600 TATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACC 251651 || ||| || || ||||| ||||||||||| |||||| ||| ||||| Sbjct 1315579 GATTTTG----TCGTTGACCATGTGCTTGAGACGTTGGTAGTATGTTGGACC 1315626 >seq44 Length=917645 Score = 86.0 bits (94), Expect = 2e-11 Identities = 153/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 302544 TACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAAT 302603 |||||| ||| || ||| ||| | ||||| | ||||| | |||||| || || Sbjct 56641 TACGGTGCCATCGTATGCAACCATGACATCTTCGAGCGCCTTGACGAGACGACGTTGGAT 56582 Query 302604 ATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGC 302663 || || || || || || || || ||||| || | || | || || |||| || Sbjct 56581 GTACCCCGTCTCAGCCGTCTTGACGGCCGTATCGATCAATCCTTCTCGTCCGGCCATGGC 56522 Query 302664 ATGGAAGAATAGCTCTTCCGGTCGT--AGCCCCCCAATAAAGGAGCTCTCAACGAAACCA 302721 |||||||| | ||||| |||| || | || | ||| | | || |||| |||||||| Sbjct 56521 GTGGAAGAAGAACTCTTGCGGT-GTCAAACCTCGCAAGTACG-AGTTCTCGACGAAACCC 56464 Query 302722 CGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCA 302761 | ||| |||||||||| ||| |||||||||||| |||| Sbjct 56463 CTCGCTTCGGGCGAATAATCGTCCTTGGTAAAGTGGGGCA 56424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816449682557