Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12- 23] 61 sequences; 27,876,544 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq24 132 3e-26 seq10 122 6e-23 seq47 109 4e-19 >seq24 Length=1725410 Score = 132 bits (146), Expect = 3e-26 Identities = 156/211 (74%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| |||||| |||||||| || || | || |||| |||| Sbjct 1413386 AGCACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAATCGGCGAGAGTGCGGCCATCC 1413445 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||| || |||||||||||| |||| | || |||||||| Sbjct 1413446 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 1413505 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || | |||||| || | ||| |||||| Sbjct 1413506 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 1413565 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCA 34976 || |||||||||||||| |||||||| |||| Sbjct 1413566 TTGCCCGTGAGGGTCTTGACAAAGATTTGCA 1413596 >seq10 Length=1963216 Score = 122 bits (134), Expect = 6e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| || | ||| |||||| || ||||| ||||| | | | |||| |||| Sbjct 1805577 AGGACCAAATGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCC 1805636 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||| || |||||||||||| |||| | || |||||||| Sbjct 1805637 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 1805696 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || | |||||| || | ||| || ||| Sbjct 1805697 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 1805756 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 || ||||| || ||||| |||||||| ||| |||| Sbjct 1805757 TTGCCCGTAAGAGTCTTGACAAAGATTTGCCTGAT 1805791 >seq47 Length=1359276 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||| ||| | || ||||||||| ||||| ||||| | || |||| |||| Sbjct 822152 CAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATC 822093 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| || || ||||||| ||| || |||||| | || | ||||||||||| Sbjct 822092 CTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGAATACCCTCCTTGTC 822033 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || ||||||| | |||| || || |||||| || | || || || Sbjct 822032 CTGGATCTTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGT 821973 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || || |||||||| || ||||| ||||| Sbjct 821972 CTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821940 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| || || | || |||| |||| || || ||||| || ||||| Sbjct 567668 CTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAA 567609 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| ||| ||||||||| | || | ||||||||||| | || || |||||| Sbjct 567608 GATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTT 567549 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || || |||||| || | || || ||||| || || |||||||| || Sbjct 567548 GTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGAC 567489 Query 34966 AAAGATCTGCAT 34977 ||||| ||||| Sbjct 567488 GAAGATTTGCAT 567477 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| || || ||||| | || |||| |||| || || ||||| || || || Sbjct 567896 CTCCTTCTGGATATTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAA 567837 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| ||| || |||||| | || | ||||||||||| | || || ||||||| Sbjct 567836 GATCAATCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTTGGTTTTGACGTT 567777 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || || |||||| || | || || ||||| || || |||||||| || Sbjct 567776 GTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGAC 567717 Query 34966 AAAGATCTGCAT 34977 ||||||||||| Sbjct 567716 GAAGATCTGCAT 567705 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| || || | || |||| |||| || || ||||| || ||||| Sbjct 821447 CTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGACCATCCTCGAGCTGCTTGCCAGCGAA 821388 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || ||||| |||||| | || | ||||||||||| | || || ||||||| Sbjct 821387 GATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTTGGTTTTGACGTT 821328 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || || |||||| || | || || ||||| || || |||||||| || Sbjct 821327 GTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGAC 821268 Query 34966 AAAGATCTGCAT 34977 ||||| ||||| Sbjct 821267 GAAGATTTGCAT 821256 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| || || ||||| | || |||| |||| || || ||||| || || || Sbjct 821675 CTCCTTCTGGATATTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAA 821616 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| ||| || |||||| | || | ||||||||||| | || || ||||||| Sbjct 821615 GATCAATCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTTGGTTTTGACGTT 821556 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || || |||||| || | || || ||||| || || |||||||| || Sbjct 821555 GTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGAC 821496 Query 34966 AAAGATCTGCAT 34977 ||||| ||||| Sbjct 821495 GAAGATTTGCAT 821484 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| || || || || | || |||| |||| || || ||||| || ||||| Sbjct 568124 CTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 568065 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || ||||| |||||| | || | ||||||||||| | || || |||||| Sbjct 568064 GATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTT 568005 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || || |||||| || | || || ||||| || || |||||||| || Sbjct 568004 GTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGAC 567945 Query 34966 AAAGATCTGCAT 34977 ||||| ||||| Sbjct 567944 GAAGATTTGCAT 567933 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| || || | || |||| |||| || || ||||| || || || Sbjct 821903 CTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAA 821844 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || ||||| |||||| | || | ||||||||||| | || || |||||| Sbjct 821843 GATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTT 821784 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || || |||||| || | || || ||||| || || |||||||| || Sbjct 821783 GTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGAC 821724 Query 34966 AAAGATCTGCAT 34977 ||||| ||||| Sbjct 821723 GAAGATTTGCAT 821712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692557867759