Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12-
23] 61 sequences; 27,876,544 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq47 122 8e-23
seq10 116 3e-21
seq24 105 6e-18
>seq47
Length=1359276
Score = 122 bits (134), Expect = 8e-23
Identities = 155/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
|||||| || | ||| |||||| || |||||||||||||| | || || | || ||
Sbjct 567686 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTC 567627
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
|||||||| ||||| || ||||| ||||||||||| | |||| || ||||||||||
Sbjct 567626 GAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTG 567567
Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705
||||| ||| | |||| | | |||||| || || ||||| | ||||||||| |
Sbjct 567566 AATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCT 567508
Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
| || |||| || || || || || |||||
Sbjct 567507 TGCCGGTCAGGGTCTTGACGAAGATTTGCAT 567477
Score = 107 bits (118), Expect = 2e-18
Identities = 152/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
|||||| || | ||| |||||| || |||||||||||||| | || || | || ||
Sbjct 821921 CACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTC 821862
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
|||||||| |||||||| || | || || ||||| | |||| || |||||||||
Sbjct 821861 GAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTG 821802
Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705
|||||| ||| | |||| | | |||||| || || ||||| | ||||||||| |
Sbjct 821801 GATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCT 821743
Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
| || |||| || || || || || |||||
Sbjct 821742 TGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821712
Score = 98.7 bits (108), Expect = 9e-16
Identities = 151/212 (71%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
|||||| || | ||| |||||| || |||||||||||||| | || || | || ||
Sbjct 821465 CACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGACCATCCTC 821406
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
|||||||| || || || || | || || ||||| | |||| | ||||||||||
Sbjct 821405 GAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCCTG 821346
Query 35647 GATCTTTTGCTTCAGA-GTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTT 35704
|||| ||| || || |||| | | |||||| || || ||||| | |||||||||
Sbjct 821345 GATC--TTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 821288
Query 35705 TTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| || |||| || || || || || |||||
Sbjct 821287 TTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821256
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
|||||| || | ||| |||||| || || ||||||||||| | || || | || ||
Sbjct 568142 CACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCATCCTC 568083
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
|||||||| || || || || | || || ||||| | |||| || ||||||||||
Sbjct 568082 AAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTG 568023
Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705
||||| ||| | |||| | | |||||| || || ||||| | ||||||||| |
Sbjct 568022 AATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCT 567964
Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
| || |||| || || || || || |||||
Sbjct 567963 TGCCGGTCAGGGTCTTGACGAAGATTTGCAT 567933
>seq10
Length=1963216
Score = 116 bits (128), Expect = 3e-21
Identities = 152/208 (73%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587
|||||||| | || ||||||||| |||||||| ||||||||||| || | || ||
Sbjct 1805580 ACCAAATGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCG 1805639
Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647
|||||||| || || || || | || |||||||| | || | || |||||||| |
Sbjct 1805640 AGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGG 1805699
Query 35648 ATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706
||||| ||| | |||| | | ||||||| ||| || ||||| | |||||||| ||
Sbjct 1805700 ATCTTGGTCTTGA-CGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTT 1805758
Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGC 35734
||||| | ||| || ||||| || |||
Sbjct 1805759 GCCCGTAAGAGTCTTGACAAAGATTTGC 1805786
>seq24
Length=1725410
Score = 105 bits (116), Expect = 6e-18
Identities = 161/227 (71%), Gaps = 2/227 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | |||||| || | || ||||||||||||||||||||||||
Sbjct 1413371 CCACCACGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAATCGGCG 1413430
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || || |||||||| || || || || | || |||||||| | ||
Sbjct 1413431 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGG 1413490
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| || |||||||| |||||| ||| | |||| | | ||||||| ||| || ||
Sbjct 1413491 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGA-CGTTGTCGATCGTGTCGGACGACTCGAC 1413549
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735
||| | ||||| || || ||||| | || || ||||| || ||||
Sbjct 1413550 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 1413596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450793256269880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |