Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12- 23] 61 sequences; 27,876,544 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq47 122 8e-23 seq10 116 3e-21 seq24 105 6e-18 >seq47 Length=1359276 Score = 122 bits (134), Expect = 8e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | ||| |||||| || |||||||||||||| | || || | || || Sbjct 567686 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTC 567627 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| ||||| || ||||| ||||||||||| | |||| || |||||||||| Sbjct 567626 GAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTG 567567 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 ||||| ||| | |||| | | |||||| || || ||||| | ||||||||| | Sbjct 567566 AATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCT 567508 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || |||| || || || || || ||||| Sbjct 567507 TGCCGGTCAGGGTCTTGACGAAGATTTGCAT 567477 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | ||| |||||| || |||||||||||||| | || || | || || Sbjct 821921 CACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTC 821862 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| |||||||| || | || || ||||| | |||| || ||||||||| Sbjct 821861 GAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTG 821802 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 |||||| ||| | |||| | | |||||| || || ||||| | ||||||||| | Sbjct 821801 GATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCT 821743 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || |||| || || || || || ||||| Sbjct 821742 TGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821712 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | ||| |||||| || |||||||||||||| | || || | || || Sbjct 821465 CACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGACCATCCTC 821406 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || || | || || ||||| | |||| | |||||||||| Sbjct 821405 GAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCCTG 821346 Query 35647 GATCTTTTGCTTCAGA-GTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTT 35704 |||| ||| || || |||| | | |||||| || || ||||| | ||||||||| Sbjct 821345 GATC--TTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 821288 Query 35705 TTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || |||| || || || || || ||||| Sbjct 821287 TTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821256 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | ||| |||||| || || ||||||||||| | || || | || || Sbjct 568142 CACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCATCCTC 568083 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || || | || || ||||| | |||| || |||||||||| Sbjct 568082 AAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTG 568023 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 ||||| ||| | |||| | | |||||| || || ||||| | ||||||||| | Sbjct 568022 AATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCT 567964 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || |||| || || || || || ||||| Sbjct 567963 TGCCGGTCAGGGTCTTGACGAAGATTTGCAT 567933 >seq10 Length=1963216 Score = 116 bits (128), Expect = 3e-21 Identities = 152/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||||||| | || ||||||||| |||||||| ||||||||||| || | || || Sbjct 1805580 ACCAAATGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCG 1805639 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 |||||||| || || || || | || |||||||| | || | || |||||||| | Sbjct 1805640 AGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGG 1805699 Query 35648 ATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 ||||| ||| | |||| | | ||||||| ||| || ||||| | |||||||| || Sbjct 1805700 ATCTTGGTCTTGA-CGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTT 1805758 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGC 35734 ||||| | ||| || ||||| || ||| Sbjct 1805759 GCCCGTAAGAGTCTTGACAAAGATTTGC 1805786 >seq24 Length=1725410 Score = 105 bits (116), Expect = 6e-18 Identities = 161/227 (71%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||| || | || |||||||||||||||||||||||| Sbjct 1413371 CCACCACGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAATCGGCG 1413430 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| || || || || | || |||||||| | || Sbjct 1413431 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGG 1413490 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | || |||||||| |||||| ||| | |||| | | ||||||| ||| || || Sbjct 1413491 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGA-CGTTGTCGATCGTGTCGGACGACTCGAC 1413549 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735 ||| | ||||| || || ||||| | || || ||||| || |||| Sbjct 1413550 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 1413596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793256269880