Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12-
23] 61 sequences; 27,876,544 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq10 127 2e-24
seq47 125 7e-24
seq24 125 7e-24
seq28 87.8 2e-12
>seq10
Length=1963216
Score = 127 bits (140), Expect = 2e-24
Identities = 163/225 (72%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||| ||| || | || | || || || || |||||||| |||||||||||| |
Sbjct 1805562 CCACCTCGGAGGCGGAGGACCAAATGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 1805621
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || |||||||| ||||| || || || | ||| ||||| || |||||
Sbjct 1805622 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGG 1805681
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| || ||||| || || ||||| ||| | ||||||||||| || ||
Sbjct 1805682 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 1805741
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGC 134711
||||| || || || || || || | ||| || || || ||||||
Sbjct 1805742 TCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGC 1805786
>seq47
Length=1359276
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| |||| ||| | ||| ||||| || ||||| || |||||||||||| |
Sbjct 822166 CCCCCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 822107
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || |||||||| ||||| ||||| ||||| ||||| || || || ||
Sbjct 822106 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGA 822047
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || || || || |||||| ||| | ||||| || || || ||
Sbjct 822046 ATACCCTCCTTGTCCTGGATCTTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACC 821987
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || || ||||| | || || ||||| ||||||||
Sbjct 821986 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821940
>seq24
Length=1725410
Score = 125 bits (138), Expect = 7e-24
Identities = 158/217 (73%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || | ||| | ||| || || || ||||||||||||||||| ||| | | ||| |
Sbjct 1413380 AGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAATCGGCGAGAGTGCGG 1413439
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| |||||||| ||||| || || || | ||| ||||| || ||||| ||||||||
Sbjct 1413440 CCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCC 1413499
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| ||||| || || ||||| ||| | ||||||||||| || || ||||| ||
Sbjct 1413500 TTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTG 1413559
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCA 134712
||||| || || || | || || || || |||||||
Sbjct 1413560 ATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 1413596
>seq28
Length=749551
Score = 87.8 bits (96), Expect = 2e-12
Identities = 332/517 (64%), Gaps = 13/517 (3%)
Strand=Plus/Plus
Query 7472 ACGAGCGCGATTACGATTACCGTTATTTTGCCGTAAAAACTTTAAAAAACGGCTACTTGT 7531
|||| ||||||| || ||| || |||| | | ||||| | | | |||||||
Sbjct 3331 ACGACCGCGATTTCGGCTACAACTACTTTGGCTTCAAAACGCTCGAGCGCTCCTACTTGC 3390
Query 7532 TGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGG 7591
| || ||||| | ||| ||||| || |||||||| |||| || || || |
Sbjct 3391 TTCGCATTGACGGCAAGGTCGCCGAACGCCCGCAGCACATGCTCATGCGTGTCGCCGTCG 3450
Query 7592 GCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAAC 7651
|||||||||| | ||||| || || |||| | ||||| | | ||||| |
Sbjct 3451 GCATTCACGGGCACGACATCGAGCGCGTCTTGCAGTCGTACAACCTCATGTCCGAGCGGT 3510
Query 7652 AGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGC----GCCTCAATTG 7707
| ||||| ||||| ||||| || | || ||| || ||||| || || |
Sbjct 3511 ACTTTACCCACGCCTCGCCGACGCTCTTCAACGCCGG----AACGCCTCACCCGCAGCTT 3566
Query 7708 TCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTG 7767
|| |||||||| ||| | || ||| || || ||||| ||||| ||| |||||||
Sbjct 3567 TCGTCGTGTTTCTTGGTCACGATGAAGGATGATTCGATCGAAGGCATCTACGACACGCT- 3625
Query 7768 CGCGA-TTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGT 7826
| || ||||| || ||||| || ||| || || ||| ||| | | || || |
Sbjct 3626 CAAGACGTGCGCTCTCATCTCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACAT 3685
Query 7827 GCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCAT 7886
||||| | ||| | ||| | ||| ||||| | | | ||| | | |||||
Sbjct 3686 CCGCGCGACCGGCTCCTACATTGCCGGCACGAACGGCTACTCGAACGGCATCGTCCCCAT 3745
Query 7887 GTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAGCGCAAAGG 7943
| | || || | ||||||| | | ||| | || ||||| || || ||||| ||
Sbjct 3746 GCTCCGTGTCTACAATAACACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGG 3805
Query 7944 CGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGAC 7980
||| || ||||| | |||||||||||||| |||
Sbjct 3806 AGCCTTCGCGATCTACCTCGAGCCGTGGCACGCTGAC 3842
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398014633720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |