Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12-
23] 61 sequences; 27,876,544 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq28 86.0 9e-12
>seq28
Length=749551
Score = 86.0 bits (94), Expect = 9e-12
Identities = 245/373 (66%), Gaps = 3/373 (1%)
Strand=Plus/Minus
Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654
|| || | ||| || |||||||||||||| || || | ||||||||| | | | |
Sbjct 3946 ACACGCTCCATGAAGAGATCGGGAATCCAGAGCGCCAAAAAGAGATCACGAGCGCGGACT 3887
Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714
|| || || || || || ||| || || ||||| | | |||| ||||| ||
Sbjct 3886 TCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCAGCGTGCCACGGC 3827
Query 69715 TCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCA 69774
|| || || ||||| | | |||| || || || || || || || || | ||| | ||
Sbjct 3826 TCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCG 3767
Query 69775 GTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAA 69834
|||||||| ||||| | ||||| || | || || || || | || || || || | |
Sbjct 3766 GTGTTATTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTGCCGGCA 3707
Query 69835 ATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTA 69894
|| || || | ||||| || || || | ||| || || || || | ||
Sbjct 3706 ATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTG 3647
Query 69895 GAGATTAGAGCACAACGT-TTCAATGTGTCATATATACCCTCTATGCTATCATCTATCAT 69953
||||| ||||| | |||| || | ||||| || || || || || |||||| ||||
Sbjct 3646 GAGATGAGAGCGC-ACGTCTTGAGCGTGTCGTAGATGCCTTCGATCGAATCATCCTTCAT 3588
Query 69954 -GTTAAGAAGAAA 69965
|| | ||||||
Sbjct 3587 CGTGACCAAGAAA 3575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908276232040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |