Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12- 23] 61 sequences; 27,876,544 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq28 86.0 9e-12 >seq28 Length=749551 Score = 86.0 bits (94), Expect = 9e-12 Identities = 245/373 (66%), Gaps = 3/373 (1%) Strand=Plus/Minus Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654 || || | ||| || |||||||||||||| || || | ||||||||| | | | | Sbjct 3946 ACACGCTCCATGAAGAGATCGGGAATCCAGAGCGCCAAAAAGAGATCACGAGCGCGGACT 3887 Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714 || || || || || || ||| || || ||||| | | |||| ||||| || Sbjct 3886 TCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCAGCGTGCCACGGC 3827 Query 69715 TCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCA 69774 || || || ||||| | | |||| || || || || || || || || | ||| | || Sbjct 3826 TCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCG 3767 Query 69775 GTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAA 69834 |||||||| ||||| | ||||| || | || || || || | || || || || | | Sbjct 3766 GTGTTATTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTGCCGGCA 3707 Query 69835 ATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTA 69894 || || || | ||||| || || || | ||| || || || || | || Sbjct 3706 ATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTG 3647 Query 69895 GAGATTAGAGCACAACGT-TTCAATGTGTCATATATACCCTCTATGCTATCATCTATCAT 69953 ||||| ||||| | |||| || | ||||| || || || || || |||||| |||| Sbjct 3646 GAGATGAGAGCGC-ACGTCTTGAGCGTGTCGTAGATGCCTTCGATCGAATCATCCTTCAT 3588 Query 69954 -GTTAAGAAGAAA 69965 || | |||||| Sbjct 3587 CGTGACCAAGAAA 3575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908276232040