Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12- 23] 61 sequences; 27,876,544 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq28 217 2e-51 >seq28 Length=749551 Score = 217 bits (240), Expect = 2e-51 Identities = 564/849 (66%), Gaps = 13/849 (2%) Strand=Plus/Minus Query 118710 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 118769 ||||| || |||| || || || | | ||| ||| | | |||||| || || || Sbjct 4270 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCG 4211 Query 118770 GTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 118829 |||||||| || || ||| || ||||| | ||||||||| || || || |||| Sbjct 4210 GTGCACAAATTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCG 4151 Query 118830 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 118889 || |||||||| |||||| | || | || || || |||| || |||||| || | | Sbjct 4150 GCGTCCTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTAC 4091 Query 118890 CAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTA 118948 || | | | || || || | || ||||| || ||||| | ||||| || | | Sbjct 4090 CAAAGCTTTTGC-GCGGGGATCGTCTTCTTGGCGCGACCCTCCTTTTCGTATTTCTCGAA 4032 Query 118949 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 119008 | ||| | |||||||| || | | || ||| || || || | | |||||||| Sbjct 4031 CAAGGCCTTGAACTCTTCGCCATAGACTTCGTGGAGACCGGGGGCTTCGGCGGGGCAGAA 3972 Query 119009 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 119068 ||| | ||| | || | |||| || |||| ||||||||| || || ||||||||||| Sbjct 3971 GAGGGGCCAGTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGC 3912 Query 119069 CGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 119128 | | |||||||| ||| ||| |||| || | || || || || | |||| || Sbjct 3911 CAAAAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAA 3852 Query 119129 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACG 119185 || | || || ||||||||||| || ||||| | ||||| | || ||| Sbjct 3851 CTCGAAGACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTT 3792 Query 119186 ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACC 119245 ||| | |||| || || | ||| ||| || | ||||| ||||| || | ||| || Sbjct 3791 GCCACCTTGGTCGACGTAGCGCGCGGTGTTATTGTAGACACGGAGCATGGGGACGATGCC 3732 Query 119246 ATCGGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATG 119303 | || | ||| || || || || || ||| | | || | || | ||||||| Sbjct 3731 GTTCGAGTAGCCGTTCGTGCCGGCAATGTAGGAGCC--GGTCGCGCGGATGTTGTGGATG 3674 Query 119304 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 119363 || ||| ||||| || || ||| ||||| | |||||| | |||| || ||||| Sbjct 3673 CTCAAACCGATACCACCGGCGGTCTTGGAGATGAGAGCGCACGTCTTGAGCGTGTCGTAG 3614 Query 119364 ATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG 119423 || || |||||||| ||| |||| | | || | ||| || ||| | || || Sbjct 3613 ATGCCTTCGATCGAATCATCCTTCATCGTGACCAAGAAACACGACGAAAGCTGCGGGTGA 3554 Query 119424 GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACC-TTGGGACATCTT 119482 || || || ||||||||||| || || | |||||| | || |||| | |||||| Sbjct 3553 GGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGT-AAAGTACCGCTCGGACATGAG 3495 Query 119483 GTCGTAGGTCTCCAAGACG-GCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCA 119541 || ||| | || ||||||| || | ||||| | ||||||||| |||| | ||| |||| Sbjct 3494 GTTGTACGACTGCAAGACGCGCTCG-ATGTCGTGCCCGTGAATGCCGACGGCGACACGCA 3436 Query 119542 TAAACATGT 119550 | | ||||| Sbjct 3435 TGAGCATGT 3427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434728443160