Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12-
23] 61 sequences; 27,876,544 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq28 217 2e-51
>seq28
Length=749551
Score = 217 bits (240), Expect = 2e-51
Identities = 564/849 (66%), Gaps = 13/849 (2%)
Strand=Plus/Minus
Query 118710 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 118769
||||| || |||| || || || | | ||| ||| | | |||||| || || ||
Sbjct 4270 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCG 4211
Query 118770 GTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 118829
|||||||| || || ||| || ||||| | ||||||||| || || || ||||
Sbjct 4210 GTGCACAAATTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCG 4151
Query 118830 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 118889
|| |||||||| |||||| | || | || || || |||| || |||||| || | |
Sbjct 4150 GCGTCCTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTAC 4091
Query 118890 CAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTA 118948
|| | | | || || || | || ||||| || ||||| | ||||| || | |
Sbjct 4090 CAAAGCTTTTGC-GCGGGGATCGTCTTCTTGGCGCGACCCTCCTTTTCGTATTTCTCGAA 4032
Query 118949 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 119008
| ||| | |||||||| || | | || ||| || || || | | ||||||||
Sbjct 4031 CAAGGCCTTGAACTCTTCGCCATAGACTTCGTGGAGACCGGGGGCTTCGGCGGGGCAGAA 3972
Query 119009 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 119068
||| | ||| | || | |||| || |||| ||||||||| || || |||||||||||
Sbjct 3971 GAGGGGCCAGTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGC 3912
Query 119069 CGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 119128
| | |||||||| ||| ||| |||| || | || || || || | |||| ||
Sbjct 3911 CAAAAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAA 3852
Query 119129 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACG 119185
|| | || || ||||||||||| || ||||| | ||||| | || |||
Sbjct 3851 CTCGAAGACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTT 3792
Query 119186 ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACC 119245
||| | |||| || || | ||| ||| || | ||||| ||||| || | ||| ||
Sbjct 3791 GCCACCTTGGTCGACGTAGCGCGCGGTGTTATTGTAGACACGGAGCATGGGGACGATGCC 3732
Query 119246 ATCGGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATG 119303
| || | ||| || || || || || ||| | | || | || | |||||||
Sbjct 3731 GTTCGAGTAGCCGTTCGTGCCGGCAATGTAGGAGCC--GGTCGCGCGGATGTTGTGGATG 3674
Query 119304 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 119363
|| ||| ||||| || || ||| ||||| | |||||| | |||| || |||||
Sbjct 3673 CTCAAACCGATACCACCGGCGGTCTTGGAGATGAGAGCGCACGTCTTGAGCGTGTCGTAG 3614
Query 119364 ATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG 119423
|| || |||||||| ||| |||| | | || | ||| || ||| | || ||
Sbjct 3613 ATGCCTTCGATCGAATCATCCTTCATCGTGACCAAGAAACACGACGAAAGCTGCGGGTGA 3554
Query 119424 GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACC-TTGGGACATCTT 119482
|| || || ||||||||||| || || | |||||| | || |||| | ||||||
Sbjct 3553 GGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGT-AAAGTACCGCTCGGACATGAG 3495
Query 119483 GTCGTAGGTCTCCAAGACG-GCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCA 119541
|| ||| | || ||||||| || | ||||| | ||||||||| |||| | ||| ||||
Sbjct 3494 GTTGTACGACTGCAAGACGCGCTCG-ATGTCGTGCCCGTGAATGCCGACGGCGACACGCA 3436
Query 119542 TAAACATGT 119550
| | |||||
Sbjct 3435 TGAGCATGT 3427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434728443160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |