Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12- 23] 61 sequences; 27,876,544 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq28 461 8e-125 seq16 95.1 1e-14 seq24 84.2 2e-11 >seq28 Length=749551 Score = 461 bits (510), Expect = 8e-125 Identities = 798/1148 (70%), Gaps = 15/1148 (1%) Strand=Plus/Minus Query 78775 GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCC 78834 ||||||| | || |||||||| | | ||||||||| ||||||||||| ||||||| Sbjct 4543 GACTCGATC---GCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTGAGCTTGCGCGCC 4487 Query 78835 TTGGTCTCGTCGAACGAAAG-GCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCC 78893 | || | ||||||| | ||| || |||||| | ||||| || || || || || Sbjct 4486 TCGGGCGAATCGAACGGCATCGCCAAGGC-CATGAACGCGTCGGCTAGACCTTGCACTCC 4428 Query 78894 GATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGT--CGGG-TAAAA 78950 ||| |||| || ||||| || | |||| || | ||||||| | |||| || | Sbjct 4427 GATGCCGATGGGGCGGTGACGGAAGTTGGAGTTCTG---CGCCTCGATGACGGGATAGTA 4371 Query 78951 GTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTT 79010 ||| ||||||| |||||||| ||| | ||| ||| ||||||| ||| || Sbjct 4370 GTTGACGTCGATGATGCGGTTCAAGTTGAAAGCGACAACCTTGACGACCTCGTGCAACTT 4311 Query 79011 GGCGAAATCAAA-ATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGC 79069 || || | | | | ||| |||||| |||| | | ||| |||| ||||| Sbjct 4310 CTTAAAGTCGTACACGCCGTTCTT-GATGAAGCTCGGCAACGCGATCGAGGCCAAGTTGC 4252 Query 79070 ACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACT 79129 | ||||| ||||||||| || ||||||||| || ||||||||||| ||||||| Sbjct 4251 AGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCGGTGCACAAATTCGACGACT 4192 Query 79130 TGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGT 79189 |||| ||||| | |||||| ||||| |||| ||| ||||||||||||| |||| Sbjct 4191 TGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCGGCGTCCTTGTAGAGCATGA 4132 Query 79190 ACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGA 79249 | || | || || || ||||| || ||||| ||| ||| | | | || ||| Sbjct 4131 AGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTACCAAAGCTTTTGCGCGGGGA 4072 Query 79250 CAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCC 79309 ||||||| ||||||| |||| || | |||| | ||||| | || | Sbjct 4071 TCGTCTTCTTGGCGCGACCCTCCTTTTCGTATTTCTCGAACAAGGCCTTGAACTCTTCGC 4012 Query 79310 CATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCT 79369 ||||||| ||| | || || ||| ||| ||||| | ||| ||||||| || | Sbjct 4011 CATAGACTTCGTGGAGACCGGGGGCTTCGGCGGGGCAGAAGAGGGGCCAGTCGCCGGCGG 3952 Query 79370 TCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAAC 79429 ||| || |||||||||||| || || ||||| || ||| ||||| || || | Sbjct 3951 CCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGCCAAAAAGAGATCACGAGCGC 3892 Query 79430 GCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCC 79489 | | ||||| | ||| |||||| || || || || || || | || ||| ||||||| Sbjct 3891 GGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCAGCGTGCC 3832 Query 79490 ACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACC 79549 ||||||| || ||||| ||||| | || |||||| ||| || |||| |||||| | Sbjct 3831 ACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGC 3772 Query 79550 GGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCC 79609 | || ||||| ||| | || ||||||||||| |||||||||| | | ||||||||| | Sbjct 3771 GCGCGGTGTTATTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTGC 3712 Query 79610 CGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACC 79669 || || | ||| |||| || ||||| | | | ||||| || |||| Sbjct 3711 CGGCAATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGG 3652 Query 79670 ACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCT 79729 |||||||||| | |||||| ||||||||| ||||||||||| |||||||| || |||| Sbjct 3651 TCTTGGAGATGAGAGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCGATCGAATCATCCT 3592 Query 79730 TCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGG 79789 |||| | ||||| ||| || ||| | ||| |||| ||| |||||||||||||| | Sbjct 3591 TCATCGTGACCAAGAAACACGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGAGCG 3532 Query 79790 TCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCG 79849 |||||| ||||| || ||| || | | ||| || | ||||| || | ||||||| Sbjct 3531 TCGGCGAGGCGTGGGTAAAGTACCGCTCGGACATGAGGTTGTACGACTGCAAGACGCGCT 3472 Query 79850 GGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTG-GGGCGTCTCG 79908 || ||||| ||||| |||||||| ||||| ||||||| | || ||| |||||| ||| Sbjct 3471 CGATGTCGTGCCCGTGAATGCCGACGGCGACACGCATGAGCATGTGCTGCGGGCGT-TCG 3413 Query 79909 CCGACATT 79916 |||| || Sbjct 3412 GCGACCTT 3405 Score = 425 bits (470), Expect = 6e-114 Identities = 782/1138 (69%), Gaps = 10/1138 (1%) Strand=Plus/Plus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 || ||| || | ||||||| ||||| |||||||| || || ||||| || ||| ||| Sbjct 3420 CCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATTCACGGGCACGACATCGAGCGCGTC 3479 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222 || | ||| |||| ||| | || || ||| || ||||| ||||||| || ||| Sbjct 3480 TTGCAGTCGTACAACCTCATGTCCGAGCGGTACTTTACCCACGCCTCGCCGACGCTCTTC 3539 Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282 |||||||| ||| |||||||| | ||| |||||| | || | ||||||||||| Sbjct 3540 AACGCCGGAACGCCTCACCCGCAGCTTTCGTCGTGTTTCTTGGTCACGATGAAGGATGAT 3599 Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGG 19342 || || ||||||||||| ||||||||| |||||| | |||||||||| |||| Sbjct 3600 TCGATCGAAGGCATCTACGACACGCTCAAGACGTGCGCTCTCATCTCCAAGACCGCCGGT 3659 Query 19343 GGTATCGGGATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAAC 19402 |||||||| | | | || ||||| ||| || | || || |||||| Sbjct 3660 GGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCCTACATTGCCGGCACGAAC 3719 Query 19403 GGAGTAGCCGA-CGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGT 19461 || || ||| ||| |||||||| |||||||| |||| ||| ||||| || | ||||| Sbjct 3720 GGC-TACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAATAACACCGCGCGCTACGT 3778 Query 19462 CAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGC 19521 | |||| || ||| ||| || || | ||||| |||||||||||||| |||||||| Sbjct 3779 CGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCGTGGCACGC 3838 Query 19522 GGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCG 19581 |||||| | || ||||| || || ||| |||||| || | ||||| | ||| ||| Sbjct 3839 TGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGCGCTCG 3898 Query 19582 CGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGA 19641 || ||||| ||| | |||||||| || || ||||||||| || ||| | || Sbjct 3899 TGATCTCTTTTTGGCGCTCTGGATTCCCGATCTCTTCATGGAGCGTGTCGAGGCCGCCGG 3958 Query 19642 AGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGC 19701 || |||| ||| | ||||| |||| ||| || || | ||| ||||| ||||| | Sbjct 3959 CGACTGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGTCTCCACGAAGTCTATGGCGAAGA 4018 Query 19702 GTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGC 19761 |||||| | |||| | || |||| | |||| || ||||||| | ||| || Sbjct 4019 GTTCAAGGCCTTGTTCGAGAAATACGAAAAGGAGGGTCGCGCCAAGAAGACGATCCCCGC 4078 Query 19762 CCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTG 19821 | | | ||| || | ||| | ||||||||| || |||| || | |||| Sbjct 4079 GCAAAAGCTTTGGTACGCAATTCTCGAGGCCCAGGTCGAAACTGGCAACCCCTTCATGCT 4138 Query 19822 CTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTC 19881 ||||||||||||||| ||| || || || || |||||| | ||| ||||||||||||| Sbjct 4139 CTACAAGGACGCCGCAAACAAGAAATCGAACCAAAAGAACCTTGGCACGATCAAGTCGTC 4198 Query 19882 CAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCT 19941 || |||| || || ||||| ||| || |||||||||| ||||| || || | Sbjct 4199 GAATTTGTGCACCGAGATCATCGAGTACTCGGCGCCGGACGAGTGCGCCGTCTGCAACTT 4258 Query 19942 GGCGTCCCTGTGCCTGCCGACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATTGTA 20001 ||| || | |||||| ||| ||||| | | | ||||||| || ||| | Sbjct 4259 GGCCTCGATCGCGTTGCCGAGCTTCATCAAGAACGGCGTGTACGACTTTAAGAAGTTGCA 4318 Query 20002 CGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTA-CC 20060 |||||| | ||| ||| | || |||| ||| ||||||| |||| || || Sbjct 4319 CGAGGTCGTCAAGGTTGTCGCTTTCAACTTGAACCGCATCATCGACGTCAACTACTATCC 4378 Query 20061 CG--ACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCA 20118 || | ||| ||||| || || || | || ||||| || |||| ||||| || || Sbjct 4379 CGTCATCGA---GGCGCAGAACTCCAACTTCCGTCACCGCCCCATCGGCATCGGAGTGCA 4435 Query 20119 GGGCCTGGCCGACGTTTTCATGATGCTCGGC-CTCTCATTCGACGATCCCAAGGCGCGCG 20177 || || ||||||| |||||| || ||| | | ||||| ||| |||||||| Sbjct 4436 AGGTCTAGCCGACGCGTTCATG-GCCTTGGCGATGCCGTTCGATTCGCCCGAGGCGCGCA 4494 Query 20178 AGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGA 20235 ||||||||||| ||||||||| || | |||||||| || || | |||||||| Sbjct 4495 AGCTCAACAAGCAAATCTTCGAGACCATCTACCACGCCGCGATCGAGTCGTCGTGCGA 4552 Score = 143 bits (158), Expect = 3e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 78183 GGCGCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTG 78242 |||||| || ||||| |||||||| |||||||| || || |||||| ||||| | ||| Sbjct 5352 GGCGCGCGTGCGCAAGTAGTACATACCCGTCTTCAGTCCTCGCTTCCAGCCGTAGAAGTG 5293 Query 78243 CATACTCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTG 78302 ||| || |||| |||| ||||| || || | |||||||||||| || ||||| Sbjct 5292 CATCGACGTGAGCTGCGCCATCGTCGGGCTCGACAAGTGGATGTTGAGCGATTGCGACTG 5233 Query 78303 GTCGATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCA 78362 ||| ||| | ||||| || ||||||| || ||||| | | |||||||| | |||||| Sbjct 5232 GTCAATGAAGGCACCTCGATCGGCCGACAGATCGATAATAGTCTTTTGCGAGAGCTCCCA 5173 Query 78363 GATGGTCCGGTAAATGGCCTTCAGCTC 78389 || |||| ||| |||||||| || || Sbjct 5172 GACGGTCTTGTAGATGGCCTTGAGATC 5146 >seq16 Length=975364 Score = 95.1 bits (104), Expect = 1e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 60024 GGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTC 60083 ||||||||| | | || ||||||||||| ||||||||| | ||||| || ||| ||| Sbjct 134984 GGCTCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTC 135043 Query 60084 TCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 ||||||||||| || || || |||||||||||||| Sbjct 135044 TCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCA 135078 >seq24 Length=1725410 Score = 84.2 bits (92), Expect = 2e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60039 ATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATT 60098 || || ||||||||||| || ||||||||||| ||||| ||||||||||||||| || Sbjct 331103 ATCTTTTGGCTCAAAAAACGAGGCCTCATGCCTGGCCTCTCTTTCTCCAACGAGCTCATA 331044 Query 60099 TCCCGGGACGAGGGCCTCCAT 60119 ||||| ||||| || || ||| Sbjct 331043 TCCCGCGACGAAGGTCTTCAT 331023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524381749840