Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12- 23] 61 sequences; 27,876,544 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq16 127 2e-24 >seq16 Length=975364 Score = 127 bits (140), Expect = 2e-24 Identities = 168/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 30225 TGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTC 30284 ||||| | |||||||| || ||||||||||| |||||||| || || ||||||| || | Sbjct 264824 TGTCC-TATACTCTGCGCCAAAATGCCTCCATTGGAACCCATAAACTGGTCCCAAATCCC 264882 Query 30285 CCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCC 30344 |||||||||| || | || || ||||||||||| | ||| || || || | |||| Sbjct 264883 CCTCTTCCCTATGACCCAACCCAACTTTGTCCAAAAACTGTCTCGATCCATTCCCATCCC 264942 Query 30345 AGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACA 30404 | || || ||||||||||| || | ||| || | || || |||| |||||||| | Sbjct 264943 AAATTTTGACCCCCTTCTCGGACAATGATTTAGAATCGGTCGATCCTCGAACGAACCAAA 265002 Query 30405 GCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 | || ||||| | || | | |||||| ||||||| || | ||||| Sbjct 265003 GTAGTTCCTCGATGATACCTCGCGTAAAGACTTTCTTGGTAGTCAAAAGGGG 265054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406310097933612