Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12- 23] 61 sequences; 27,876,544 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq47 170 4e-37 seq10 168 2e-36 seq24 165 2e-35 >seq47 Length=1359276 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| || |||||||| ||||| || || || | ||||| Sbjct 821467 AGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGACCATCC 821408 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || ||||||||||| || |||| || ||||||||| Sbjct 821407 TCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCC 821348 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||| ||||| || || ||||| ||| || |||||||| ||||||||| Sbjct 821347 TGGATCTTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 821288 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | ||||| Sbjct 821287 TTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821256 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| || ||||| || ||||| || || || | ||||| Sbjct 568144 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCATCC 568085 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || ||||||||||| || |||| || ||||||||| Sbjct 568084 TCAAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCC 568025 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| || || ||||| ||| || |||||||| ||||||||| Sbjct 568024 TGAATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 567965 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | ||||| Sbjct 567964 TTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 567933 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| || |||||||| ||||| || || || | ||||| Sbjct 821923 AGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCC 821864 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| || ||||||||||| || |||| || |||||||| Sbjct 821863 TCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCT 821804 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| || || ||||| ||| || |||||||| ||||||||| Sbjct 821803 TGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 821744 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | ||||| Sbjct 821743 TTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821712 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| || |||||||| ||||| || || || | ||||| Sbjct 567688 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCC 567629 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| | || || ||||| || |||| || ||||||||| Sbjct 567628 TCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 567569 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||| ||||| ||| || |||||||| ||||||||| Sbjct 567568 TGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 567509 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | ||||| Sbjct 567508 TTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 567477 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| || ||||| || || || || || || | ||||| Sbjct 567916 AGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGCGAGCGTGCGGCCATCC 567857 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| | || |||||||| || |||| || ||||||||| Sbjct 567856 TCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCC 567797 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||| ||||| || || ||||| ||| || |||||||| ||||||||| Sbjct 567796 TGGATCTTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 567737 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | |||||| Sbjct 567736 TTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 567705 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| || |||||||| || || || || || | ||||| Sbjct 822151 AGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCC 822092 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| | || |||||||| || |||| || ||||||||| Sbjct 822091 TCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCC 822032 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||| ||||| || || ||||| ||| || |||||||| ||||||||| Sbjct 822031 TGGATCTTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 821972 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | ||||| Sbjct 821971 TTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821940 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| || ||||| || || || || || || | ||||| Sbjct 821695 AGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGCGAGCGTGCGGCCATCC 821636 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| | || |||||||| || |||| || ||||||||| Sbjct 821635 TCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCC 821576 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||| ||||| || || ||||| ||| || |||||||| ||||||||| Sbjct 821575 TGGATCTTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 821516 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | ||||| Sbjct 821515 TTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821484 >seq10 Length=1963216 Score = 168 bits (186), Expect = 2e-36 Identities = 159/203 (78%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | || || || ||||| ||||||||||| || || || | ||| | ||||| Sbjct 1805577 AGGACCAAATGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCC 1805636 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || ||||| ||||| || || | ||||||||||| Sbjct 1805637 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 1805696 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| ||||| || || |||||||| ||||||||| Sbjct 1805697 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 1805756 Query 211083 TTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| |||||||| ||||| Sbjct 1805757 TTGCCCGTAAGAGTCTTGACAAA 1805779 >seq24 Length=1725410 Score = 165 bits (182), Expect = 2e-35 Identities = 163/211 (77%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| ||||| ||||| ||||| || || || | ||||| Sbjct 1413386 AGCACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAATCGGCGAGAGTGCGGCCATCC 1413445 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || ||||| ||||| || || | ||||||||||| Sbjct 1413446 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 1413505 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| ||||| || || |||||||| ||||| ||| Sbjct 1413506 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 1413565 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCA 211113 || |||||||| ||||| ||||| | |||| Sbjct 1413566 TTGCCCGTGAGGGTCTTGACAAAGATTTGCA 1413596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151094050265