Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12- 23] 61 sequences; 27,876,544 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq10 125 2e-23 seq24 118 2e-21 seq47 93.3 1e-13 >seq10 Length=1963216 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | ||| || || ||||| |||||||||||||| ||||| || || | Sbjct 1805570 GAGGCGGAGGACCAAATGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCG 1805629 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || ||||||||||| || | |||||||| | || ||| ||||| Sbjct 1805630 GCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTC 1805689 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || ||||| | || | |||| || ||| || || || || Sbjct 1805690 CTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGT 1805749 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGA 152097 || || |||||||| |||||||| || |||| Sbjct 1805750 GATCGTCTTGCCCGTAAGAGTCTTGACAAAGA 1805781 >seq24 Length=1725410 Score = 118 bits (130), Expect = 2e-21 Identities = 151/207 (73%), Gaps = 1/207 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || ||||| ||||| |||||||||||||| | ||| | ||||| || | Sbjct 1413391 CAAG-TGGAGGGTCGACTCCTTTTGAATGTTGTAATCGGCGAGAGTGCGGCCATCCTCGA 1413449 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||||||||| || | |||||||| | || ||| |||||||| ||||| | Sbjct 1413450 GCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGA 1413509 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | |||| || ||| || || || || || || |||| Sbjct 1413510 TCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGC 1413569 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCA 152103 ||||||| ||||| || |||| |||| Sbjct 1413570 CCGTGAGGGTCTTGACAAAGATTTGCA 1413596 >seq47 Length=1359276 Score = 93.3 bits (102), Expect = 1e-13 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | || || || ||||| || ||||||||||||||||| | || | Sbjct 567695 GAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCG 567636 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || || |||||||| | | ||||||||| | | || || || Sbjct 567635 GCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTC 567576 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || ||||| || ||||| | || | |||| || ||| || || || || Sbjct 567575 CTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGT 567516 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || ||||| ||||||| ||||| Sbjct 567515 GATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 567477 Score = 89.7 bits (98), Expect = 1e-12 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | || || || ||||| || ||||||||||||||||| | || | Sbjct 821474 GAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCG 821415 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || || |||||||| || | || ||||| | | || || || Sbjct 821414 ACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTC 821355 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || |||||| | || | |||| || ||| || || || || Sbjct 821354 CTTGTCCTGGATCTTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGT 821295 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || ||||| ||||||| ||||| Sbjct 821294 GATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821256 Score = 84.2 bits (92), Expect = 5e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | || || || ||||| || ||||| ||||||||||| | || | Sbjct 568151 GAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCG 568092 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || || |||||||| || | || ||||| | | || || || Sbjct 568091 GCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTC 568032 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || ||||| || ||||| | || | |||| || ||| || || || || Sbjct 568031 CTTGTCCTGAATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGT 567972 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || ||||| ||||||| ||||| Sbjct 567971 GATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 567933 Score = 84.2 bits (92), Expect = 5e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | || || || ||||| || ||||||||||||||||| | || | Sbjct 821930 GAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCG 821871 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || || || ||||| || | || ||||| | | || || || Sbjct 821870 GCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTC 821811 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || ||||| | || | |||| || ||| || || || || Sbjct 821810 CTTGTCTTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGT 821751 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || ||||| ||||||| ||||| Sbjct 821750 GATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153819898216931