Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015455.1_202016-12-
23] 61 sequences; 27,876,544 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq47 152 4e-32
seq24 134 1e-26
seq10 118 8e-22
>seq47
Length=1359276
Score = 152 bits (168), Expect = 4e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
||||| | || | || ||||| ||| ||||| |||||| ||||||||||| ||||||
Sbjct 822166 CCCCCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 822107
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| | || || |||||||| || ||||||||||| ||||| || |||| ||
Sbjct 822106 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGA 822047
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCAC 44289
| ||| ||||| ||| ||||| | || | ||| | || ||||| | ||| || ||
Sbjct 822046 ATACCCTCCTTGTCCTGGATCTT-GGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGAC 821988
Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| | ||| |||||||| || || |||||||| ||||||||||||||
Sbjct 821987 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821940
Score = 150 bits (166), Expect = 1e-31
Identities = 172/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || |||| || | | ||||| ||| ||||| |||||| ||||||||||||||
Sbjct 567707 CATACCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATC 567648
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|||||| ||| | || || |||||||| || || |||||||| |||||||| ||||
Sbjct 567647 GGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGG 567588
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| ||||| ||| | | | || ||||| | ||| ||
Sbjct 567587 GGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTC 567528
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | ||| |||||||| || || |||||||| ||||||||||||||
Sbjct 567527 GACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 567477
Score = 147 bits (162), Expect = 2e-30
Identities = 175/235 (74%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || |||| || | | ||||| ||| ||||| |||||| ||||| |||||
Sbjct 821717 TTGCATACCTCCTCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTA 821658
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|||||||| ||| | || || |||||||| || ||||||||||| ||||| || ||
Sbjct 821657 GTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTC 821598
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGG 44282
|| || | ||| ||||| ||| ||||| | || | ||| | || ||||| | ||
Sbjct 821597 TGGGGGAATACCCTCCTTGTCCTGGATCTT-GGTTTTGACGTTGTCAATCGTGTCCGAGG 821539
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || ||||| | ||| |||||||| || || |||||||| ||||||||||||||
Sbjct 821538 ACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821484
Score = 141 bits (156), Expect = 7e-29
Identities = 174/235 (74%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || |||| || | | ||||| ||| ||||| |||||| ||||| |||||
Sbjct 567938 TTGCATACCTCCTCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTA 567879
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|||||||| ||| | || || |||||||| || ||||||||||| ||||| || ||
Sbjct 567878 GTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTC 567819
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGG 44282
|| || | ||| ||||| ||| ||||| | || | ||| | || ||||| | ||
Sbjct 567818 TGGGGGAATACCCTCCTTGTCCTGGATCTT-GGTTTTGACGTTGTCAATCGTGTCCGAGG 567760
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || ||||| | ||| |||||||| || || |||||||| |||||||| |||||
Sbjct 567759 ACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 567705
Score = 141 bits (156), Expect = 7e-29
Identities = 174/235 (74%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || |||| || | | ||||| ||| ||||| |||||| |||||||||||
Sbjct 821489 TTGCATACCTCCTCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTA 821430
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||||||||| ||| | || || |||||||| || || ||||| | ||| || || ||
Sbjct 821429 ATCGGCGAGCGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTC 821370
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGG 44282
|| || | ||| ||||| ||| ||||| | || | ||| | || ||||| | ||
Sbjct 821369 TGGGGGAATACCCTCCTTGTCCTGGATCTT-GGTTTTGACGTTGTCAATCGTGTCCGAGG 821311
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || ||||| | ||| |||||||| || || |||||||| ||||||||||||||
Sbjct 821310 ACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821256
Score = 138 bits (152), Expect = 8e-28
Identities = 171/234 (73%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || |||| || | | ||||| ||| ||||| |||||| |||||||||||
Sbjct 821945 TTGCATACCTCCTCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTA 821886
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||||||||| ||| | || || |||||||| || |||||||| | ||| || || ||
Sbjct 821885 ATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTC 821826
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
|| || | || ||||| || ||||| ||| | | | || ||||| | |||
Sbjct 821825 TGGGGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGGA 821766
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| | ||| |||||||| || || |||||||| ||||||||||||||
Sbjct 821765 CTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 821712
Score = 132 bits (146), Expect = 3e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169
||| |||| || | | ||||| ||| ||||| |||||| ||||| |||||||||||
Sbjct 568160 TCCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGC 568101
Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229
||| ||| | || || |||||||| || || ||||| | ||| || || |||| ||
Sbjct 568100 GAGCGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGG 568041
Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCAC 44289
| || ||||| ||| ||||| ||| | | | || ||||| | ||| || ||
Sbjct 568040 AATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGAC 567981
Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| | ||| |||||||| || || |||||||| ||||||||||||||
Sbjct 567980 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 567933
>seq24
Length=1725410
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| ||| || || ||||||||| ||||||||||||||||| ||| | || ||
Sbjct 1413388 CACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAATCGGCGAGAGTGCGGCCATCCTC 1413447
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| ||||| ||||| | ||| ||||| |||| || | |||||||| ||
Sbjct 1413448 GAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTG 1413507
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | | | || ||||||| || || ||||| | || || |||||
Sbjct 1413508 GATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTT 1413567
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCA 44336
|||||||||||||| || ||||||||||
Sbjct 1413568 GCCCGTGAGGGTCTTGACAAAGATTTGCA 1413596
>seq10
Length=1963216
Score = 118 bits (130), Expect = 8e-22
Identities = 143/195 (73%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
|||||||||||||||||| ||||| | ||| | || || |||||||| ||||| ||
Sbjct 1805597 CTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 1805656
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265
||| | ||| ||||| |||| || | |||||||| || ||||| ||| | |
Sbjct 1805657 GATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTT 1805716
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| || ||||||| || || ||||| | || |||||||| ||||| || ||||| ||
Sbjct 1805717 GTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGAC 1805776
Query 44326 GAAGATTTGCATGAT 44340
||||||||| ||||
Sbjct 1805777 AAAGATTTGCCTGAT 1805791
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990132369637
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |