Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq73 98.7 2e-15
seq71 86.0 1e-11
>seq73
Length=1807266
Score = 98.7 bits (108), Expect = 2e-15
Identities = 197/289 (68%), Gaps = 10/289 (3%)
Strand=Plus/Plus
Query 281739 TTCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCAAAC 281798
||||||||||| || | || || |||||||||||| ||||| | | |||||
Sbjct 1174465 TTCGTGAAGATGTAACGAGCCGAAGCCGCGTCTTTACCACCTTGCAGACGAGTGCCAAAT 1174524
Query 281799 TGACCCTCCGG--CAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGT 281856
||||| | ||| | | ||| ||| | ||| ||| ||||||| | | || ||||||
Sbjct 1174525 TGACCGTTCGGGTCGAGAAC--GTTGAGGTTGTTGGACCCGACGAACTGTTGCGCCAGGC 1174582
Query 281857 TGACGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACAT 281916
|| ||| || || || | | |||||||| || || || ||| ||||| || |
Sbjct 1174583 CGATGATGGTGCCTTGCAAACTCATTTCACCGTGATGGTACGCCGAGTGCTCGGCGACGT 1174642
Query 281917 AACCACTGAACTGTGCTACCTTCACGTCTGATGTCAAGTTGCGTTTGAAAGCGCAA---T 281973
|||| | || ||| | ||||| | ||| |||| ||||| ||||| ||||
Sbjct 1174643 AACCGCCCAATTGTCCGACCTTGATCTCTTGCGTCAGCTTGCGCTTGAA---GCAACCGA 1174699
Query 281974 ATAATACTTTTCGTTGAGAAGGCTTGAAACCATCAACGACAGACGGAAT 282022
| || || || |||||| || ||||| ||||||| |||||| |||||
Sbjct 1174700 ACAAGACCTTGCGTTGACCCGGTTTGAACCCATCAATGACAGAGGGAAT 1174748
>seq71
Length=931223
Score = 86.0 bits (94), Expect = 1e-11
Identities = 133/190 (70%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 319012 TAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATCCTCGATGTGGTGGAAA 319071
|||||||| ||||| ||||| | | ||| | ||||| || |||||||||||||||||
Sbjct 332120 TAACGCCACTGGATGTACTGCATCGCCGTCTTCTCAAGGTGTTCCTCGATGTGGTGGAAC 332179
Query 319072 GCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCAAACACTACCGATGGTG 319131
|| || || |||||||| || | ||||| || || |||||| ||| | || | |
Sbjct 332180 GCGTGTTGAGCCACGTACGCGACACGCAAGTTAGGGTGCTTCTCAACCTTGCCTTCGTCG 332239
Query 319132 GCTTCCATTTGTCCCGTGAGCACCTTAATGAGGGTGCTTTTCCCCGCACCGTTTTCGCCC 319191
| | | | ||||| | | ||| || ||||| ||| || |||||||| |||
Sbjct 332240 GGCACGGTCTCGCCCGTCAAGAGCTTGATCAGGGTCGATTTACCGGCACCGTTGGGGCCA 332299
Query 319192 ACCACACCGA 319201
|| | |||||
Sbjct 332300 ACGATACCGA 332309
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057821885674280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |