Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq73 98.7 2e-15 seq71 86.0 1e-11 >seq73 Length=1807266 Score = 98.7 bits (108), Expect = 2e-15 Identities = 197/289 (68%), Gaps = 10/289 (3%) Strand=Plus/Plus Query 281739 TTCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCAAAC 281798 ||||||||||| || | || || |||||||||||| ||||| | | ||||| Sbjct 1174465 TTCGTGAAGATGTAACGAGCCGAAGCCGCGTCTTTACCACCTTGCAGACGAGTGCCAAAT 1174524 Query 281799 TGACCCTCCGG--CAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGT 281856 ||||| | ||| | | ||| ||| | ||| ||| ||||||| | | || |||||| Sbjct 1174525 TGACCGTTCGGGTCGAGAAC--GTTGAGGTTGTTGGACCCGACGAACTGTTGCGCCAGGC 1174582 Query 281857 TGACGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACAT 281916 || ||| || || || | | |||||||| || || || ||| ||||| || | Sbjct 1174583 CGATGATGGTGCCTTGCAAACTCATTTCACCGTGATGGTACGCCGAGTGCTCGGCGACGT 1174642 Query 281917 AACCACTGAACTGTGCTACCTTCACGTCTGATGTCAAGTTGCGTTTGAAAGCGCAA---T 281973 |||| | || ||| | ||||| | ||| |||| ||||| ||||| |||| Sbjct 1174643 AACCGCCCAATTGTCCGACCTTGATCTCTTGCGTCAGCTTGCGCTTGAA---GCAACCGA 1174699 Query 281974 ATAATACTTTTCGTTGAGAAGGCTTGAAACCATCAACGACAGACGGAAT 282022 | || || || |||||| || ||||| ||||||| |||||| ||||| Sbjct 1174700 ACAAGACCTTGCGTTGACCCGGTTTGAACCCATCAATGACAGAGGGAAT 1174748 >seq71 Length=931223 Score = 86.0 bits (94), Expect = 1e-11 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 319012 TAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATCCTCGATGTGGTGGAAA 319071 |||||||| ||||| ||||| | | ||| | ||||| || ||||||||||||||||| Sbjct 332120 TAACGCCACTGGATGTACTGCATCGCCGTCTTCTCAAGGTGTTCCTCGATGTGGTGGAAC 332179 Query 319072 GCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCAAACACTACCGATGGTG 319131 || || || |||||||| || | ||||| || || |||||| ||| | || | | Sbjct 332180 GCGTGTTGAGCCACGTACGCGACACGCAAGTTAGGGTGCTTCTCAACCTTGCCTTCGTCG 332239 Query 319132 GCTTCCATTTGTCCCGTGAGCACCTTAATGAGGGTGCTTTTCCCCGCACCGTTTTCGCCC 319191 | | | | ||||| | | ||| || ||||| ||| || |||||||| ||| Sbjct 332240 GGCACGGTCTCGCCCGTCAAGAGCTTGATCAGGGTCGATTTACCGGCACCGTTGGGGCCA 332299 Query 319192 ACCACACCGA 319201 || | ||||| Sbjct 332300 ACGATACCGA 332309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057821885674280