Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq84 104 2e-17 >seq84 Length=1022938 Score = 104 bits (114), Expect = 2e-17 Identities = 225/337 (67%), Gaps = 0/337 (0%) Strand=Plus/Plus Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986 |||||||||| || | ||||| ||||| || |||||| || ||| | | | | | Sbjct 243037 TTCCAAGCACTCAAGATGATCCTCCTATCGGTGGGGTTTTCCTTGATACTCTTGAGAACC 243096 Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCT 102046 || | || || || || || || || | |||||| | | |||| ||||| Sbjct 243097 TGCATCAACTGATCGACCCCCTCCCCCTGATAATCATCCTTGGCGGTCCTATACTCTGCG 243156 Query 102047 CCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAA 102106 || ||||| ||||||||||| ||||| || ||||| | |||||| || || || | Sbjct 243157 CCAAAATGTCTCCACTGAAACCCATAAACCGGTCCCAAATCTCCCTCTTCCCTATGTCCC 243216 Query 102107 AAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCT 102166 || |||| || || | |||| ||| ||||||||| |||||||||| | || || Sbjct 243217 AACCCAACCTTGTCCAGAAATTGTCTCGATCCATTCCCATCCCAAATCTTGACCCCCTTG 243276 Query 102167 GCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACA 102226 | |||| |||| || || || |||| | ||||| | ||||| || | | | Sbjct 243277 TCGGATAATAATTTGGAATCGGTCGACCCTCGAACGAACCAAAGGAGTTCCTCGATGATA 243336 Query 102227 CCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAA 102263 |||| | ||| || |||| || || ||||| |||| Sbjct 243337 CCTCGCGTAAAGACCTTCTTGGTCGTCAAAAGGGGAA 243373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361250513171156