Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq84 176 5e-39 seq61 154 2e-32 seq73 136 4e-27 seq88 118 1e-21 >seq84 Length=1022938 Score = 176 bits (194), Expect = 5e-39 Identities = 173/223 (78%), Gaps = 3/223 (1%) Strand=Plus/Plus Query 116647 GTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACAC 116706 |||||| ||||||||||| || |||||||||| ||| ||| ||||| |||||||||||| Sbjct 125195 GTACAAGAAGGCCGAGGCATCCTTCTGGACCGCCGAAGAGATGGACTTGTCCAAGGACAT 125254 Query 116707 GAGCGACTGGGAGCGCTTGAACGA---CAACGAGCGCCATTTCATCAAGCACGTGCTGGC 116763 | ||||||||| | | | | | |||||||| | |||||| |||||| || || Sbjct 125255 GCACGACTGGGACAACAAGCTCAAGCCCGACGAGCGCTACTTCATCTCGCACGTCCTCGC 125314 Query 116764 CTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGA 116823 ||||||||||||| |||||| || ||||||||||| |||||||||| ||| || || Sbjct 125315 CTTTTTCGCCGCCTCCGACGGGATTGTCAACGAGAACTTGGTCGAGCGATTCTCTGGTGA 125374 Query 116824 GGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATC 116866 ||| ||| |||||||| || ||||| || || || || ||| Sbjct 125375 GGTCCAGTCCGCCGAGGCTCGATGCTTTTATGGTTTCCAAATC 125417 Score = 86.0 bits (94), Expect = 6e-12 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 117093 CCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCA 117152 |||| || ||||||||||| || ||| | |||||||| |||| ||| ||||||||||| Sbjct 125922 CCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTCTCCAACGAGCTCA 125981 Query 117153 TCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTG 117189 |||| | |||||||| || || ||||||||| || Sbjct 125982 TCTCGCGTGACGAGGGCCTCCACACCGACTTTGCTTG 126018 >seq61 Length=3738257 Score = 154 bits (170), Expect = 2e-32 Identities = 166/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| || || || |||| |||||| || | Sbjct 597221 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTCA 597280 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || |||| ||||| |||||||| ||| | ||||| Sbjct 597281 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCA 597339 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||||||||| ||||| || |||| ||||| ||| ||| ||||| Sbjct 597340 GCAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAA 597399 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 ||||||||||||| | |||||||| | ||| | ||| Sbjct 597400 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCGC 597436 Score = 154 bits (170), Expect = 2e-32 Identities = 158/204 (77%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| || || || |||| |||||| || | Sbjct 597677 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTCA 597736 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || |||| ||||| |||||||| ||| | ||||| Sbjct 597737 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCA 597795 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||||||||| ||||| || |||| ||||| ||| ||| ||||| Sbjct 597796 GCAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAA 597855 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | |||||||| Sbjct 597856 CATCCAGAAGGAGTCGACGCTGCA 597879 Score = 150 bits (166), Expect = 2e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || || || ||||| || ||||| |||| |||||| || | Sbjct 596765 ATGCAAATTTTTGTCAAGACCCTGACCGGCAAGACGATCACACTCGAGGTCGAATCCTCG 596824 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | |||| |||||| || |||| ||||| |||||||| ||| | ||||| Sbjct 596825 GATACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCA 596883 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||||||||| ||||| || |||| ||||| ||| ||| ||||| Sbjct 596884 GCAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAA 596943 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 ||||||||||||| | |||||||| | ||| | ||| Sbjct 596944 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCGC 596980 Score = 150 bits (166), Expect = 2e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || || || ||||| || || || |||| |||||| || | Sbjct 596993 ATGCAAATCTTTGTCAAGACCCTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTCG 597052 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | |||| |||||| ||||||| ||||| |||||||| ||| | ||||| Sbjct 597053 GATACGATCGACAACG-TCAAGGCCAAAATTCAGGACAAGGAGGGCATTCCCCCCGACCA 597111 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||||||||| ||||| || |||| ||||| ||| ||| ||||| Sbjct 597112 GCAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAA 597171 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 ||||||||||||| | |||||||| | ||| | ||| Sbjct 597172 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCGC 597208 Score = 150 bits (166), Expect = 2e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || ||||| |||||||| || ||||| |||| ||||| | | Sbjct 871843 ATGCAGATCTTTGTCAAGACGCTTACGGGCAAGACGATCACGCTCGAGGTCGAGTCGTCG 871902 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || |||| ||||| || |||| ||||| ||||| |||||| | ||||| Sbjct 871903 GACACGATTGACAACG-TCAAGACCAAGATTCAAGACAAGGAGGGTATCCCCCCCGACCA 871961 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||||||||| ||||| || |||| ||||| ||| ||| ||||| Sbjct 871962 GCAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAA 872021 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 ||||||||||||| | |||||||| | ||| | ||| Sbjct 872022 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCGC 872058 Score = 145 bits (160), Expect = 8e-30 Identities = 164/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || | || ||||| || ||||| |||| |||||| || | Sbjct 597449 ATGCAAATCTTTGTCAAGACCTTGACCGGCAAGACGATCACACTCGAGGTCGAATCCTCG 597508 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | |||| |||||| || |||| ||||| |||||||| ||| | ||||| Sbjct 597509 GATACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCA 597567 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||||||||| ||||| || |||| ||||| ||| ||| ||||| Sbjct 597568 GCAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAA 597627 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 ||||||||||||| | |||||||| | ||| | ||| Sbjct 597628 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCGC 597664 Score = 127 bits (140), Expect = 2e-24 Identities = 152/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || || || ||||| || || || |||| |||||| || | Sbjct 872071 ATGCAAATCTTTGTCAAGACCCTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTCG 872130 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | |||| |||||| || || | || || |||||||| ||| | ||||| Sbjct 872131 GATACGATCGACAACG-TCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCCGACCA 872189 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| |||||||| ||||| || |||| ||||| ||| ||||||||| Sbjct 872190 GCAGCGATTGATCTTTGCGGGCAAGCAGCTCGAGGACGGTCGCACGCTCGCCGACTACAA 872249 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| | ||||| || Sbjct 872250 TATCCAGAAGGAGTCGACGCTCCA 872273 >seq73 Length=1807266 Score = 136 bits (150), Expect = 4e-27 Identities = 168/227 (74%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 40691 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCG 40750 ||||||| || || || || ||||||||||| ||||||||| |||| ||||| | ||| Sbjct 312934 TGCAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 312993 Query 40751 ACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 | | | | |||| |||||| || || | ||||| || || |||||| | |||||| Sbjct 312994 ATACGATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCCCCAGACCAG 313052 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| ||||||| || ||||| ||||| || || | |||||| | |||||||||| Sbjct 313053 CAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAAC 313112 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||| |||||| | || || || | ||| | ||| || | || || Sbjct 313113 ATCCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTGCGTGGTGG 313159 Score = 127 bits (140), Expect = 2e-24 Identities = 169/234 (72%), Gaps = 3/234 (1%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || ||| |||||||||| | || | |||||||| ||| ||| ||| ||| | || || Sbjct 1385708 ATTTGGGCCATGTACAAACAAGCTCAAGCGTCGTTTTGGTCCGCCGAAGAGATCGATCTC 1385767 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTG---AACGACAACGAGCGCCATTTCATCAAG 116752 ||| ||| ||||||| | | | | ||| || |||| ||| | || || Sbjct 1385768 GGCAACGACCTCCACGACTGGCACCACAAGCTCAACAACGACGAACGCTACTTTATTGCC 1385827 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 |||||||| ||||| |||||||| || || |||| |||||||||||||||||| | Sbjct 1385828 CACGTGCTCGCCTTCTTCGCCGCTTCGGATGGGGTCGTGAACGAGAATCTGGTCGAGAGG 1385887 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATC 116866 ||| | ||||||||| | ||||| ||| ||||||| || |||||||||||| Sbjct 1385888 TTCTCAAGTGAGGTGCAGTTCGCCGAAGCGAGGTGCTTTTATGGCTTTCAGATC 1385941 Score = 100 bits (110), Expect = 3e-16 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 117086 TTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAAC 117145 |||||| |||| ||||||||||| ||||| || |||||||| ||||| ||||| |||| Sbjct 1386415 TTCGCCTCCATCTTTTGGCTCAAAAAACGAGGGCTCATGCCTGGCCTCTCTTTCTCCAAC 1386474 Query 117146 GAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCAT 117205 |||||||| ||| | ||||| ||||| ||| ||| || ||| | |||||| ||| Sbjct 1386475 GAGCTCATTTCCCGCGACGAAGGTCTTCATACCGAATTCGCCGTCCTCTTGTTCAGCCAT 1386534 Query 117206 TTG 117208 ||| Sbjct 1386535 TTG 1386537 >seq88 Length=4649774 Score = 118 bits (130), Expect = 1e-21 Identities = 149/202 (74%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 40692 GCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGA 40751 |||||| ||||| || || || |||||||| || |||||| |||| ||||| | |||| Sbjct 184611 GCAAATCTTCGTCAAGACACTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 184670 Query 40752 CAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGC 40810 || | | |||| |||| || || | ||||| || |||||||| | ||||||| Sbjct 184671 CACGATCGACAACG-TCAAAACCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGC 184729 Query 40811 AACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 40870 |||| ||||||| || ||||| ||||| || || | |||||| | ||||||||||| Sbjct 184730 AACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACA 184789 Query 40871 TCCAGAAGGAGGCCACGCTGCA 40892 | || |||||| | || || || Sbjct 184790 TTCAAAAGGAGTCGACCCTCCA 184811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218195322560