Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq88 138 1e-27
seq61 131 1e-25
seq73 116 3e-21
>seq88
Length=4649774
Score = 138 bits (152), Expect = 1e-27
Identities = 157/211 (74%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| || ||||| |||||||||||||| ||| || ||||| |||||||
Sbjct 184817 ACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCG 184758
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || || || |||||||||| ||||| || || || ||||| |||||||||
Sbjct 184757 AGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGG 184698
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || ||| || | |||| ||||| | ||||||||||| ||| | ||| |||
Sbjct 184697 ATCTTGGTTTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTG 184638
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740
|| || || || || || || || ||| |||
Sbjct 184637 CCCGTAAGTGTCTTGACGAAGATTTGCCTGG 184607
>seq61
Length=3738257
Score = 131 bits (144), Expect = 1e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || ||||| || || |||||||||||| | ||||| |||||
Sbjct 596974 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 596915
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || ||| |||| | |||||||| ||||| || ||||||||||||||
Sbjct 596914 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 596855
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || || || | |||| || |||| | |||||||||| || | ||| ||
Sbjct 596854 AATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACCTCGAGTGTGATCGTCTT 596795
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||||||| || || |||||||| |||||
Sbjct 596794 GCCGGTCAGGGTCTTGACAAAAATTTGCAT 596765
Score = 131 bits (144), Expect = 1e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || ||||| || || |||||||||||| | ||||| |||||
Sbjct 597202 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 597143
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || ||| |||| | |||||||| ||||| || ||||||||||||||
Sbjct 597142 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 597083
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|||||| || || | |||| || |||| | |||||||||| || | ||| ||
Sbjct 597082 AATTTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACCTCGAGCGTAATCGTCTT 597023
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||||||| || || ||||| || |||||
Sbjct 597022 GCCGGTCAGGGTCTTGACAAAGATTTGCAT 596993
Score = 122 bits (134), Expect = 8e-23
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || ||||| || || |||||||||||| | ||||| |||||
Sbjct 597430 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 597371
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || ||| |||| | |||||||| ||||| || ||||||||||||||
Sbjct 597370 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 597311
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || || || | |||| ||||| | | |||||||||| || | ||| ||
Sbjct 597310 AATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACCTCGAGCGTAATCGTCTT 597251
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||||||| || || || || || |||||
Sbjct 597250 GCCGGTCAGGGTCTTGACGAAGATTTGCAT 597221
Score = 122 bits (134), Expect = 8e-23
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || ||||| || || |||||||||||| | ||||| |||||
Sbjct 597658 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 597599
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || ||| |||| | |||||||| ||||| || ||||||||||||||
Sbjct 597598 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 597539
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || || || | |||| || |||| | |||||||||| || | ||| ||
Sbjct 597538 AATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACCTCGAGTGTGATCGTCTT 597479
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||||| || || ||||| || |||||
Sbjct 597478 GCCGGTCAAGGTCTTGACAAAGATTTGCAT 597449
Score = 122 bits (134), Expect = 8e-23
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || ||||| || || |||||||||||| | ||||| |||||
Sbjct 597886 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 597827
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || ||| |||| | |||||||| ||||| || ||||||||||||||
Sbjct 597826 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 597767
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || || || | |||| ||||| | | |||||||||| || | ||| ||
Sbjct 597766 AATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACCTCGAGCGTAATCGTCTT 597707
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||||||| || || || || || |||||
Sbjct 597706 GCCGGTCAGGGTCTTGACGAAGATTTGCAT 597677
Score = 122 bits (134), Expect = 8e-23
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || ||||| || || |||||||||||| | ||||| |||||
Sbjct 872052 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 871993
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || ||| |||| | |||||||| ||||| || || ||||||||||||
Sbjct 871992 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGGATACCCTCCTTGTCTTG 871933
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || || || | || | ||||||| ||||||||||| || | ||| ||
Sbjct 871932 AATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTT 871873
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||| || || || || ||||| ||||||||
Sbjct 871872 GCCCGTAAGCGTCTTGACAAAGATCTGCAT 871843
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||||| || ||||| || || || ||||| ||| | ||||| |||||
Sbjct 872280 CACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGCGAGCGTGCGACCGTCCTC 872221
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| || || || |||| | |||||||| ||||| || ||||||||||| ||
Sbjct 872220 GAGCTGCTTGCCCGCAAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTG 872161
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| || |||| | |||||||||| || | ||| ||
Sbjct 872160 GATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACCTCGAGCGTAATCGTCTT 872101
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||||||| || || ||||| || |||||
Sbjct 872100 GCCGGTCAGGGTCTTGACAAAGATTTGCAT 872071
>seq73
Length=1807266
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||||| || ||||| ||||| |||||||| ||| || ||||| ||||||
Sbjct 313142 CACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTC 313083
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| || || || |||||||||| ||||| || || || || || ||||||||
Sbjct 313082 GAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGGATTCCTTCCTTGTCCTG 313023
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| || || | ||||||||||| ||| | || ||
Sbjct 313022 GATCTTGGCCTTGACGTTGTCGATCGTATCGGACGACTCGACCTCGAGGGTGATGGTCTT 312963
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCA 118737
||| || || || || ||||| || ||||
Sbjct 312962 GCCCGTGAGGGTCTTGACAAAGATTTGCA 312934
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433829575179952
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