Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq88 138 1e-27 seq61 131 1e-25 seq73 116 3e-21 >seq88 Length=4649774 Score = 138 bits (152), Expect = 1e-27 Identities = 157/211 (74%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| || ||||| |||||||||||||| ||| || ||||| ||||||| Sbjct 184817 ACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCG 184758 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || || |||||||||| ||||| || || || ||||| ||||||||| Sbjct 184757 AGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGG 184698 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || ||| || | |||| ||||| | ||||||||||| ||| | ||| ||| Sbjct 184697 ATCTTGGTTTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTG 184638 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740 || || || || || || || || ||| ||| Sbjct 184637 CCCGTAAGTGTCTTGACGAAGATTTGCCTGG 184607 >seq61 Length=3738257 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || ||||| || || |||||||||||| | ||||| ||||| Sbjct 596974 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 596915 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || ||| |||| | |||||||| ||||| || |||||||||||||| Sbjct 596914 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 596855 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || | |||| || |||| | |||||||||| || | ||| || Sbjct 596854 AATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACCTCGAGTGTGATCGTCTT 596795 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||||| || || |||||||| ||||| Sbjct 596794 GCCGGTCAGGGTCTTGACAAAAATTTGCAT 596765 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || ||||| || || |||||||||||| | ||||| ||||| Sbjct 597202 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 597143 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || ||| |||| | |||||||| ||||| || |||||||||||||| Sbjct 597142 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 597083 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 |||||| || || | |||| || |||| | |||||||||| || | ||| || Sbjct 597082 AATTTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACCTCGAGCGTAATCGTCTT 597023 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||||| || || ||||| || ||||| Sbjct 597022 GCCGGTCAGGGTCTTGACAAAGATTTGCAT 596993 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || ||||| || || |||||||||||| | ||||| ||||| Sbjct 597430 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 597371 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || ||| |||| | |||||||| ||||| || |||||||||||||| Sbjct 597370 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 597311 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || | |||| ||||| | | |||||||||| || | ||| || Sbjct 597310 AATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACCTCGAGCGTAATCGTCTT 597251 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||||| || || || || || ||||| Sbjct 597250 GCCGGTCAGGGTCTTGACGAAGATTTGCAT 597221 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || ||||| || || |||||||||||| | ||||| ||||| Sbjct 597658 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 597599 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || ||| |||| | |||||||| ||||| || |||||||||||||| Sbjct 597598 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 597539 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || | |||| || |||| | |||||||||| || | ||| || Sbjct 597538 AATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACCTCGAGTGTGATCGTCTT 597479 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||||| || || ||||| || ||||| Sbjct 597478 GCCGGTCAAGGTCTTGACAAAGATTTGCAT 597449 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || ||||| || || |||||||||||| | ||||| ||||| Sbjct 597886 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 597827 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || ||| |||| | |||||||| ||||| || |||||||||||||| Sbjct 597826 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 597767 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || | |||| ||||| | | |||||||||| || | ||| || Sbjct 597766 AATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACCTCGAGCGTAATCGTCTT 597707 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||||| || || || || || ||||| Sbjct 597706 GCCGGTCAGGGTCTTGACGAAGATTTGCAT 597677 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || ||||| || || |||||||||||| | ||||| ||||| Sbjct 872052 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 871993 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || ||| |||| | |||||||| ||||| || || |||||||||||| Sbjct 871992 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGGATACCCTCCTTGTCTTG 871933 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || | || | ||||||| ||||||||||| || | ||| || Sbjct 871932 AATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTT 871873 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| || || || || ||||| |||||||| Sbjct 871872 GCCCGTAAGCGTCTTGACAAAGATCTGCAT 871843 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||||| || ||||| || || || ||||| ||| | ||||| ||||| Sbjct 872280 CACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGCGAGCGTGCGACCGTCCTC 872221 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || || |||| | |||||||| ||||| || ||||||||||| || Sbjct 872220 GAGCTGCTTGCCCGCAAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTG 872161 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| || |||| | |||||||||| || | ||| || Sbjct 872160 GATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACCTCGAGCGTAATCGTCTT 872101 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||||| || || ||||| || ||||| Sbjct 872100 GCCGGTCAGGGTCTTGACAAAGATTTGCAT 872071 >seq73 Length=1807266 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||||| || ||||| ||||| |||||||| ||| || ||||| |||||| Sbjct 313142 CACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTC 313083 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || || |||||||||| ||||| || || || || || |||||||| Sbjct 313082 GAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGGATTCCTTCCTTGTCCTG 313023 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| || || | ||||||||||| ||| | || || Sbjct 313022 GATCTTGGCCTTGACGTTGTCGATCGTATCGGACGACTCGACCTCGAGGGTGATGGTCTT 312963 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCA 118737 ||| || || || || ||||| || |||| Sbjct 312962 GCCCGTGAGGGTCTTGACAAAGATTTGCA 312934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829575179952