Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq88 159 7e-34 >seq88 Length=4649774 Score = 159 bits (176), Expect = 7e-34 Identities = 467/715 (65%), Gaps = 11/715 (2%) Strand=Plus/Plus Query 248758 GTCATTCAGGACAACGCGCACCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGGAG 248817 ||||| || |||||| ||| ||| || |||| || ||||| | ||||| | Sbjct 2234216 GTCATCATGGCCAACGCCGACCGCCTCAACAGCGCCGTTATCTACGACCGCGATTTTGGC 2234275 Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | | ||||| ||||||||||| ||| || || | || || || |||||| Sbjct 2234276 TACAACTACTTTGGCTTCAAAACGCTCGAGCGCTCCTACTTGCTTCGCATCGACGGCAAG 2234335 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 ||| |||||| ||||||||| | ||||| || || ||||| || ||| | ||| Sbjct 2234336 GTCGCCGAACGACCGCAGCACATGCTCATGCGCGTCGCCGTCGGCATCCACGGTCACGAC 2234395 Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997 || ||| |||| | || |||||| | ||| || |||| | || || ||| | Sbjct 2234396 ATCGAGCGCGTCTTGCAGTCGTACAACCTCATGTCCGAGCGCTACTTTACCCACGCCTCG 2234455 Query 248998 CCGACGCTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGC 249056 |||||||||||||||||||| || | || || ||||| || || || || | | Sbjct 2234456 CCGACGCTCTTCAACGCCGGAACGCCTC-ACCCGCAGCTTTCGTCCTGTTTCCTGGTCAC 2234514 Query 249057 CATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAAGAT 249113 ||| | ||||| || | || ||||| || |||||||| | ||||| ||| || Sbjct 2234515 GATGAAGGACGATTCGATTGAAGGCATCTACGACACGCTCA---AGACGTGTGCGCTCAT 2234571 Query 249114 TTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTA 249173 ||| || ||| ||||| |||||| | | | |||||||| |||| || || || Sbjct 2234572 TTCCAAGACCGCCGGCGGTATCGGTTTGAGCATTCATAACATCCGCGCGACCGGCTCCTA 2234631 Query 249174 CATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTC 249233 |||| ||||| || || | | || ||||| ||| | || || || | Sbjct 2234632 CATCGCCGGTACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAA 2234691 Query 249234 CACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTT 249290 |||||| | | | || |||| | || | || || | ||||| || || | Sbjct 2234692 CACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCTGGAGCCTTCGCGATCTACCT 2234751 Query 249291 GGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGA 249350 ||| ||||||||| || | || |||||||||||| | |||||| ||||||| || Sbjct 2234752 CGAACCGTGGCACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGA 2234811 Query 249351 GCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCG 249410 | | | || ||||| ||||||| | || ||| | | || | || ||| || Sbjct 2234812 GGAAGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCGGATCTCTTTATGGAGCG 2234871 Query 249411 CGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCCCCGGACCTC 249465 ||| |||||| |||||| ||| | || | | || |||| ||||| | |||| Sbjct 2234872 TGTCGAGGCCGCCGGCGAGTGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGCCTC 2234926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073764253809408