Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq88 159 7e-34
>seq88
Length=4649774
Score = 159 bits (176), Expect = 7e-34
Identities = 467/715 (65%), Gaps = 11/715 (2%)
Strand=Plus/Plus
Query 248758 GTCATTCAGGACAACGCGCACCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGGAG 248817
||||| || |||||| ||| ||| || |||| || ||||| | ||||| |
Sbjct 2234216 GTCATCATGGCCAACGCCGACCGCCTCAACAGCGCCGTTATCTACGACCGCGATTTTGGC 2234275
Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877
||| | | ||||| ||||||||||| ||| || || | || || || ||||||
Sbjct 2234276 TACAACTACTTTGGCTTCAAAACGCTCGAGCGCTCCTACTTGCTTCGCATCGACGGCAAG 2234335
Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937
||| |||||| ||||||||| | ||||| || || ||||| || ||| | |||
Sbjct 2234336 GTCGCCGAACGACCGCAGCACATGCTCATGCGCGTCGCCGTCGGCATCCACGGTCACGAC 2234395
Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997
|| ||| |||| | || |||||| | ||| || |||| | || || ||| |
Sbjct 2234396 ATCGAGCGCGTCTTGCAGTCGTACAACCTCATGTCCGAGCGCTACTTTACCCACGCCTCG 2234455
Query 248998 CCGACGCTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGC 249056
|||||||||||||||||||| || | || || ||||| || || || || | |
Sbjct 2234456 CCGACGCTCTTCAACGCCGGAACGCCTC-ACCCGCAGCTTTCGTCCTGTTTCCTGGTCAC 2234514
Query 249057 CATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAAGAT 249113
||| | ||||| || | || ||||| || |||||||| | ||||| ||| ||
Sbjct 2234515 GATGAAGGACGATTCGATTGAAGGCATCTACGACACGCTCA---AGACGTGTGCGCTCAT 2234571
Query 249114 TTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTA 249173
||| || ||| ||||| |||||| | | | |||||||| |||| || || ||
Sbjct 2234572 TTCCAAGACCGCCGGCGGTATCGGTTTGAGCATTCATAACATCCGCGCGACCGGCTCCTA 2234631
Query 249174 CATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTC 249233
|||| ||||| || || | | || ||||| ||| | || || || |
Sbjct 2234632 CATCGCCGGTACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAA 2234691
Query 249234 CACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTT 249290
|||||| | | | || |||| | || | || || | ||||| || || |
Sbjct 2234692 CACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCTGGAGCCTTCGCGATCTACCT 2234751
Query 249291 GGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGA 249350
||| ||||||||| || | || |||||||||||| | |||||| ||||||| ||
Sbjct 2234752 CGAACCGTGGCACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGA 2234811
Query 249351 GCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCG 249410
| | | || ||||| ||||||| | || ||| | | || | || ||| ||
Sbjct 2234812 GGAAGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCGGATCTCTTTATGGAGCG 2234871
Query 249411 CGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCCCCGGACCTC 249465
||| |||||| |||||| ||| | || | | || |||| ||||| | ||||
Sbjct 2234872 TGTCGAGGCCGCCGGCGAGTGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGCCTC 2234926
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073764253809408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |