Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq88 282 4e-71 seq61 107 2e-18 seq73 95.1 1e-14 >seq88 Length=4649774 Score = 282 bits (312), Expect = 4e-71 Identities = 965/1494 (65%), Gaps = 52/1494 (3%) Strand=Plus/Minus Query 22502 GATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGC 22561 || ||| |||| ||||| | || ||| || || |||||| ||||| ||||||||| Sbjct 2235735 GAAGTGTACGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGACTCGTCGACGCGGTCGGC 2235676 Query 22562 ATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATC 22621 || ||||| ||| |||||||| | || |||||||| | ||| || ||||||| Sbjct 2235675 ATTGGCGCGCACACAAGCGAGTTGCGCAGACCGTGCTTCGCAATCTTCTCCTTGAGCTCG 2235616 Query 22622 GACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCG 22681 ||||||||||||| |||| ||| |||||| |||||| ||||| |||||| |||| Sbjct 2235615 GACCAGTCCCACATATCGCTCGGGGTCACAC---CCCACAAGTCGTACTGCAACGCGCCC 2235559 Query 22682 CGACTCGCCGGGCTGCCTTCGTACGTTTCGTA--------------CGGA-----CCATA 22722 || ||||| ||| ||| ||| ||| | || | ||| Sbjct 2235558 TGAGAAGCCGGAGATCCTGGGTAAGTTGAGTAGTAGCCGGGGTCGCCCGAGTTAGCGATA 2235499 Query 22723 TA----TCGCG-GCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAG 22777 ||||| || | ||||| || ||| | |||| ||| || || ||||||||| Sbjct 2235498 GCAAAGTCGCGCGCCATGTCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAG 2235439 Query 22778 ATTTTCTTGTTCAATTCG-GCGGC---GGCGACGCTTTCGTACGGCATACGCATCATCAC 22833 |||| |||||| | | | ||| | ||||| ||| ||||||| || || Sbjct 2235438 ATTTGCTTGTTGAGCTTGCGCGCCTCGGGCGAA----TCGAACGGCATCGCCAATGCCAT 2235383 Query 22834 GAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACAC 22893 ||||||||| || | || || || || || ||||| || |||| | || || Sbjct 2235382 GAACGCGTCGGCGAGCCCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAGTA 2235323 Query 22894 TTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCAC 22953 | |||||| | ||||| | || ||||| | | ||||||||| | || Sbjct 2235322 CTGCGCCTCGATGACGGGATAGTAGTTGACGTCGATGATGCGGTTCAAGTTGAAAGCGAC 2235263 Query 22954 AATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGATTGTACAACAAACTT 23013 | || | | |||||| | ||||| || | | || || Sbjct 2235262 GACCTTGACGACCTCGTGCAACTTCTTGAAGTCGCACACGCCG--TTCTTGATAAAGCTC 2235205 Query 23014 GTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTAC 23073 | ||| |||||||||| | |||||| ||||| ||| || | || |||||| | Sbjct 2235204 GGCAACG-CGATCGAGGCCAAATTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCAAT 2235146 Query 23074 AATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTT-GCTTTTTC 23132 || ||||| || || || |||| |||||||| | || | ||||| | ||| | Sbjct 2235145 GATCTCGGTGCACAGGTTCGAGGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTT 2235086 Query 23133 GATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGA 23192 | |||| | ||||||||||||||| |||| |||| || |||||||| | |||| | Sbjct 2235085 GTTTGCG-GCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCGAGAA 2235027 Query 23193 TCGCTCGCCACATAGTCTGAGCGTGAACACGTCG-CACGTACCTGCCTTCTTCCTCGTAC 23251 |||| ||| | | || ||| | | |||| | | | ||| || | ||||| Sbjct 2235026 TCGCGTACCAAAGCTTTTGCGCGGGGAT-CGTCTTCTTGGCGCGGCCCTCCTTTTCGTAT 2234968 Query 23252 TTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATC 23311 || | | ||| ||| || || | || || ||| |||||||| | || Sbjct 2234967 TTCTCGAACAGGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCGGCG 2234908 Query 23312 GGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATC 23371 || || | ||| |||| | | || || || |||||| |||||||| ||| Sbjct 2234907 GGGCAGAAGAGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATAAAGAGATCCGGAATC 2234848 Query 23372 CATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAA 23431 || || || |||| || || || ||||| || ||||| |||||| |||||| | Sbjct 2234847 CAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGG 2234788 Query 23432 TCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGT 23491 |||| || || || ||||| || |||||||| |||||||| | || || || || || Sbjct 2234787 TCCAGGAACTCGAAGACGTCAGCGTGCCACGGTTCGAGGTAGATCGCGAAGGCTCCAGGA 2234728 Query 23492 CTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGC 23551 | ||| ||||| || || |||||||| || || ||||||||||| || | ||||| || Sbjct 2234727 CGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGG 2234668 Query 23552 ACGAGACCGTTGGACGCGCCG--CCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGT 23609 |||| ||||| || |||| | || || || | || || | || || | || Sbjct 2234667 ACGATGCCGTTCGAGTAGCCGTTCGTA--CCGGCGATGTAGGAGCCGGTCGCGCGGATGT 2234610 Query 23610 TGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAG 23669 | |||| | ||||| || || ||| | | || || || | ||| || || || | Sbjct 2234609 TATGAATGCTCAAACCGATACCGCCGGCGGTCTTGGAAATGAGCGCACACGTCTTGAGCG 2234550 Query 23670 TGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTT 23729 ||||||||||||| || || || || || ||| ||||| |||||| || || | | Sbjct 2234549 TGTCGTAGATGCCTTCAATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAAAGCT 2234490 Query 23730 GCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCG 23789 ||| | ||||| |||| ||| || ||||| |||||| |||||||| | | | Sbjct 2234489 GCGGGTGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGG 2234430 Query 23790 ACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGA 23849 |||| || ||||||| | | | || || ||||| | ||||| || |||| ||||| Sbjct 2234429 ACATGAGGTTGTACGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGA 2234370 Query 23850 CGCGCATCATCATGTATTGAGGTC--TC-TCGACCGTGACGCCGTTAATTTTGAACAGAT 23906 ||||||| | ||||| || |||| || ||||| | ||||| || | || | Sbjct 2234369 CGCGCATGAGCATGTGCTGCGGTCGTTCGGCGACCTT---GCCGTCGATGCGAAGCAAGT 2234313 Query 23907 ATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGT 23960 | || || | | |||||| || ||||| |||| ||| ||| || || |||| Sbjct 2234312 AGGAGCGCTCGAGCGTTTTGAAGCCAAAGTAGTTGTAGCCAAAATCGCGGTCGT 2234259 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 || || |||||| ||||| ||||| || || ||||| ||||||||| |||| || || | Sbjct 184605 AACCAGGCAAATCTTCGTCAAGACACTTACGGGCAAGACGATCACCCTCGAGGTCGAGTC 184664 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 |||||||| |||| | |||||| | || |||||||||||| | ||||| || Sbjct 184665 GTCCGACACGATCGACAACGTCAAAACCAAGATCCAAGACAAGGAAGGCATCCCGCCAGA 184724 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 |||||| ||||| || || || ||||| ||| | || || || || ||| || Sbjct 184725 CCAGCAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTA 184784 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||||||||| || ||||| || || |||| || Sbjct 184785 CAACATTCAAAAGGAGTCGACCCTCCACTTGGTCCT 184820 >seq61 Length=3738257 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || ||||| ||||| ||||| |||||||| |||| || ||| | || Sbjct 596765 ATGCAAATTTTTGTCAAGACCCTGACCGGCAAGACGATCACACTCGAGGTCGAATCCTCG 596824 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | ||||| | || ||||||||| ||| | || ||||||||| Sbjct 596825 GATACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 596884 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| | || ||||| ||||| ||| | || ||| || | |||||| ||| Sbjct 596885 CAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAAC 596944 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || ||||| || || |||| ||| | || | || |||| Sbjct 596945 ATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCGCCTCCGAGGTGGTA 596993 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| ||||| ||||| ||||| || |||| || ||| | || Sbjct 597221 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTCA 597280 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||| ||| | || ||||||||| Sbjct 597281 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 597340 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| | || ||||| ||||| ||| | || ||| || | |||||| ||| Sbjct 597341 CAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAAC 597400 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || ||||| || || |||| ||| | || | || |||| Sbjct 597401 ATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCGCCTCCGAGGTGGTA 597449 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| ||||| ||||| ||||| || |||| || ||| | || Sbjct 597677 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTCA 597736 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||| ||| | || ||||||||| Sbjct 597737 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 597796 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| | || ||||| ||||| ||| | || ||| || | |||||| ||| Sbjct 597797 CAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAAC 597856 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || ||||| || || |||| || Sbjct 597857 ATCCAGAAGGAGTCGACGCTGCACTTGGTGCT 597888 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||| ||||| ||||| ||||| || |||| || ||| | || Sbjct 596993 ATGCAAATCTTTGTCAAGACCCTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTCG 597052 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | ||||| | ||| ||||||||| ||| | || ||||||||| Sbjct 597053 GATACGATCGACAACGTCAAGGCCAAAATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 597112 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| | || ||||| ||||| ||| | || ||| || | |||||| ||| Sbjct 597113 CAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAAC 597172 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || ||||| || || |||| ||| | || | || |||| Sbjct 597173 ATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCGCCTCCGAGGTGGTA 597221 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||| |||| ||||| |||||||| |||| || ||| | || Sbjct 597449 ATGCAAATCTTTGTCAAGACCTTGACCGGCAAGACGATCACACTCGAGGTCGAATCCTCG 597508 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | ||||| | || ||||||||| ||| | || ||||||||| Sbjct 597509 GATACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 597568 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| | || ||||| ||||| ||| | || ||| || | |||||| ||| Sbjct 597569 CAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAAC 597628 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || ||||| || || |||| ||| | || | || |||| Sbjct 597629 ATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCGCCTCCGAGGTGGTA 597677 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| || || ||||| |||||||| |||| || || |||| Sbjct 871843 ATGCAGATCTTTGTCAAGACGCTTACGGGCAAGACGATCACGCTCGAGGTCGAGTCGTCG 871902 Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | ||||| || ||| | | ||||||| || | || |||||||| Sbjct 871903 GACACGATTGACAACGTCAAGACCAAGATTCAAG-ACAAGGAGGGTATCCCCCCCGACCA 871961 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| | || ||||| ||||| ||| | || ||| || | |||||| || Sbjct 871962 GCAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAA 872021 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || || ||||| || || |||| ||| | || | || |||| Sbjct 872022 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCGCCTCCGAGGTGGTA 872071 >seq73 Length=1807266 Score = 95.1 bits (104), Expect = 1e-14 Identities = 164/238 (69%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 31194 TGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCG 31253 ||||||| || || ||||| || || ||||| || |||||| |||| || || |||||| Sbjct 312934 TGCAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 312993 Query 31254 ACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGC 31313 | | |||| | ||||| | || |||||||||||| | || || ||||||| Sbjct 312994 ATACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCCCCAGACCAGC 313053 Query 31314 AGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACA 31373 | ||||| || || || ||||| ||| | || || || || ||| || |||| Sbjct 313054 AACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACA 313113 Query 31374 TTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAGCG 31427 | ||||| || ||||| || || |||| || | ||| | || ||| ||||||| Sbjct 313114 TCCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTGCGTGGTGGTGCCAAGAAGCG 313171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765530755520