Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq88 125 1e-23
>seq88
Length=4649774
Score = 125 bits (138), Expect = 1e-23
Identities = 609/957 (64%), Gaps = 14/957 (1%)
Strand=Plus/Minus
Query 79611 CAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 79670
|||||||| || |||| ||| || ||||| ||||| | ||| || | || ||
Sbjct 2235202 CAACGCGATCGAGGCCAAATTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCAATGAT 2235143
Query 79671 TTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 79730
|| ||||| ||||| |||| || || || | || | ||| || || |||||
Sbjct 2235142 CTCGGTGCACAGGTTCGAGGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTT 2235083
Query 79731 ACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 79790
|| ||||| || || |||||||| | || ||||| | ||| | ||| | ||||||
Sbjct 2235082 TGCGGCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCGAGAATCGC 2235023
Query 79791 TTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGT 79850
| ||| | | | || || | |||| | || ||||||||| | |
Sbjct 2235022 GTACCAAAGCTTTTGCGCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATT-TCT 2234964
Query 79851 ATATAATCGTTCG-AACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGAC 79909
| | | || ||||| || || | || |||| | || || |||| | || |
Sbjct 2234963 CGAACAGGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGC 2234904
Query 79910 ACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAA 79969
| | | | |||||| || | ||| || || | |||||||||||| |||||||| |
Sbjct 2234903 AGAAGAGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATAAAGAGATCCGGAATCCAGA 2234844
Query 79970 GAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 80029
| || | || ||||| | | | ||||| || || ||||| ||| || |
Sbjct 2234843 GCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCA 2234784
Query 80030 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTT 80089
||||| | | | |||| ||||||||||| | ||| || || | |||| || || |
Sbjct 2234783 GGAACTCGAAGACGTCAGCGTGCCACGGTTCGAGGTAGATCGCGAAGGCTCCAGGACGCT 2234724
Query 80090 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 80149
|||| || || || || | ||| | |||||||| || || || | | ||| || | |
Sbjct 2234723 TGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGA 2234664
Query 80150 TACCATTGGATGTA-CCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTA 80208
| || || || ||| || || || |||| ||| ||| || | || || || ||| |
Sbjct 2234663 TGCCGTTCGA-GTAGCCGTTCGTACCGGCGATGTAGGAGCCGGTCGCGCGGATGTTATGA 2234605
Query 80209 ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTATC 80267
|| | ||| || || || || | || || || | || || ||| || | ||| ||
Sbjct 2234604 ATGCTCAAACCGATACCGCCGGCGGTCTTGGAAATGAGCGCACA-CGTCTTGAGCGTGTC 2234546
Query 80268 ATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 80327
|||||||| || || ||| || |||| | | || |||||| || | || |
Sbjct 2234545 GTAGATGCCTTCAATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGG 2234486
Query 80328 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAG 80387
|| ||||| || || || | || || || ||||| ||||| | || ||||
Sbjct 2234485 GTGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACAT 2234426
Query 80388 TAGATTGTACGTCT-CAATAGCTGATTCTATATCCCATTGA---TGAATTCCTACCGCGA 80443
|| ||||||| || ||| | | || || || ||| || || || || ||||
Sbjct 2234425 GAGGTTGTACGACTGCAAGA-CGCGCTCGATGTC---GTGACCGTGGATGCCGACGGCGA 2234370
Query 80444 CACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAG 80503
| ||||| | ||||||||| |||| ||| ||| |||| | || | |||||| |
Sbjct 2234369 CGCGCATGAGCATGTGCTGCGGTCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGG 2234310
Query 80504 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAA 80560
| || | ||||| || ||||| |||||||| ||| || || ||||| ||||
Sbjct 2234309 AGCGCTCGAGCGTTTTGAAGCCAAAGTAGTTGTAGCCAAAATCGCGGTCGTAGATAA 2234253
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718267399375840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |