Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq88 125 1e-23 >seq88 Length=4649774 Score = 125 bits (138), Expect = 1e-23 Identities = 609/957 (64%), Gaps = 14/957 (1%) Strand=Plus/Minus Query 79611 CAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 79670 |||||||| || |||| ||| || ||||| ||||| | ||| || | || || Sbjct 2235202 CAACGCGATCGAGGCCAAATTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCAATGAT 2235143 Query 79671 TTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 79730 || ||||| ||||| |||| || || || | || | ||| || || ||||| Sbjct 2235142 CTCGGTGCACAGGTTCGAGGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTT 2235083 Query 79731 ACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 79790 || ||||| || || |||||||| | || ||||| | ||| | ||| | |||||| Sbjct 2235082 TGCGGCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCGAGAATCGC 2235023 Query 79791 TTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGT 79850 | ||| | | | || || | |||| | || ||||||||| | | Sbjct 2235022 GTACCAAAGCTTTTGCGCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATT-TCT 2234964 Query 79851 ATATAATCGTTCG-AACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGAC 79909 | | | || ||||| || || | || |||| | || || |||| | || | Sbjct 2234963 CGAACAGGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGC 2234904 Query 79910 ACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAA 79969 | | | | |||||| || | ||| || || | |||||||||||| |||||||| | Sbjct 2234903 AGAAGAGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATAAAGAGATCCGGAATCCAGA 2234844 Query 79970 GAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 80029 | || | || ||||| | | | ||||| || || ||||| ||| || | Sbjct 2234843 GCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCA 2234784 Query 80030 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTT 80089 ||||| | | | |||| ||||||||||| | ||| || || | |||| || || | Sbjct 2234783 GGAACTCGAAGACGTCAGCGTGCCACGGTTCGAGGTAGATCGCGAAGGCTCCAGGACGCT 2234724 Query 80090 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 80149 |||| || || || || | ||| | |||||||| || || || | | ||| || | | Sbjct 2234723 TGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGA 2234664 Query 80150 TACCATTGGATGTA-CCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTA 80208 | || || || ||| || || || |||| ||| ||| || | || || || ||| | Sbjct 2234663 TGCCGTTCGA-GTAGCCGTTCGTACCGGCGATGTAGGAGCCGGTCGCGCGGATGTTATGA 2234605 Query 80209 ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTATC 80267 || | ||| || || || || | || || || | || || ||| || | ||| || Sbjct 2234604 ATGCTCAAACCGATACCGCCGGCGGTCTTGGAAATGAGCGCACA-CGTCTTGAGCGTGTC 2234546 Query 80268 ATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 80327 |||||||| || || ||| || |||| | | || |||||| || | || | Sbjct 2234545 GTAGATGCCTTCAATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGG 2234486 Query 80328 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAG 80387 || ||||| || || || | || || || ||||| ||||| | || |||| Sbjct 2234485 GTGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACAT 2234426 Query 80388 TAGATTGTACGTCT-CAATAGCTGATTCTATATCCCATTGA---TGAATTCCTACCGCGA 80443 || ||||||| || ||| | | || || || ||| || || || || |||| Sbjct 2234425 GAGGTTGTACGACTGCAAGA-CGCGCTCGATGTC---GTGACCGTGGATGCCGACGGCGA 2234370 Query 80444 CACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAG 80503 | ||||| | ||||||||| |||| ||| ||| |||| | || | |||||| | Sbjct 2234369 CGCGCATGAGCATGTGCTGCGGTCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGG 2234310 Query 80504 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAA 80560 | || | ||||| || ||||| |||||||| ||| || || ||||| |||| Sbjct 2234309 AGCGCTCGAGCGTTTTGAAGCCAAAGTAGTTGTAGCCAAAATCGCGGTCGTAGATAA 2234253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718267399375840