Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq88 116 5e-21 >seq88 Length=4649774 Score = 116 bits (128), Expect = 5e-21 Identities = 406/627 (65%), Gaps = 10/627 (2%) Strand=Plus/Minus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081 || || | |||||||||||| |||||||| || || | || ||||| | | | Sbjct 2234874 ACACGCTCCATAAAGAGATCCGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACT 2234815 Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141 ||||| || || ||||| ||| || |||||| | | | |||| ||||||||| Sbjct 2234814 TCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCAGCGTGCCACGGT 2234755 Query 72142 TCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 72201 || | ||| || || | |||| || || ||||| || || || || | ||| | ||| Sbjct 2234754 TCGAGGTAGATCGCGAAGGCTCCAGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCG 2234695 Query 72202 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAG 72261 ||||| || || || | | ||| || | || || || || || || || |||| | Sbjct 2234694 GTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTACCGGCG 2234635 Query 72262 ATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTA 72321 || ||| || | || || || || ||| | ||| || || || || | || Sbjct 2234634 ATGTAGGAGCCGGTCGCGCGGATGTTATGAATGCTCAAACCGATACCGCCGGCGGTCTTG 2234575 Query 72322 GAGATTAATGCGCATCGT-TTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 72380 || || | || || ||| || | ||| || |||||||| || || ||| ||| |||| Sbjct 2234574 GAAATGAGCGCACA-CGTCTTGAGCGTGTCGTAGATGCCTTCAATCGAATCGTCCTTCAT 2234516 Query 72381 GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGG 72440 | | || |||||| || | || | || ||||| || || || | || || Sbjct 2234515 CGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGAGCGTCGG 2234456 Query 72441 AGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCT-CAATAGCTGATTCTA 72499 || ||||| ||||| | || |||| || ||||||| || ||| | | || | Sbjct 2234455 CGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTACGACTGCAAGA-CGCGCTCGA 2234397 Query 72500 TATCCCATTGA---TGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAA 72556 | || ||| || || || || ||||| ||||| | ||| ||||| |||| ||| Sbjct 2234396 TGTC---GTGACCGTGGATGCCGACGGCGACGCGCATGAGCATGTGCTGCGGTCGTTCGG 2234340 Query 72557 CGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGT 72616 ||| |||| | || | ||||||||| || | ||||| || ||||| |||| Sbjct 2234339 CGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGCGTTTTGAAGCCAAAGTAGT 2234280 Query 72617 TGTATGAAAAGTCTCGTTCGTAAATAA 72643 |||| ||| || || ||||| |||| Sbjct 2234279 TGTAGCCAAAATCGCGGTCGTAGATAA 2234253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671137891278560