Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq61 82.4 6e-11 >seq61 Length=3738257 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/213 (69%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| || || || || |||||| || ||||||||||| || | || ||||||| Sbjct 596974 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 596915 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 |||||||| || || | || || |||||||| || || | | ||||||||| Sbjct 596914 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 596855 Query 48637 AATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTT 48694 ||| || ||||| | | || || ||||| | || || ||||| ||| || || Sbjct 596854 AATCTTGGCCTTGACGTTGTCG--ATCGTATCCGAGGATTCGACCTCGAGTGTGATCGTC 596797 Query 48695 TTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 || ||||| || || || |||||||| |||||| Sbjct 596796 TTGCCGGTCAGGGTCTTGACAAAAATTTGCATC 596764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250399096156