Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq61 109 5e-19
>seq61
Length=3738257
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||||| || || ||||| || | ||| |||||| | ||| | |||||
Sbjct 597202 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 597143
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
||||| || || | ||||| |||| ||||| || || ||||| || || ||||| |
Sbjct 597142 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 597083
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
|||||| ||||||||| | ||| || || | | ||||| || | ||| || || ||
Sbjct 597082 AATTTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACCTCGAGCGTAATCGTCTT 597023
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || || |||||||| |||||
Sbjct 597022 GCCGGTCAGGGTCTTGACAAAGATTTGCAT 596993
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||||| || || ||||| || | ||| |||||| | ||| | |||||
Sbjct 872052 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 871993
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
||||| || || | ||||| |||| ||||| || || || ||||| || ||||| |
Sbjct 871992 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGGATACCCTCCTTGTCTTG 871933
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
||| || | ||||||| | | | ||||| | ||||| || | |||||| || ||
Sbjct 871932 AATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTT 871873
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| ||||| || || ||||||||||||||
Sbjct 871872 GCCCGTAAGCGTCTTGACAAAGATCTGCAT 871843
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 94780 TCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCT 94839
||| |||| | || | ||||||||||| || || ||||| || | ||| ||||||
Sbjct 597904 TCCCCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 597845
Query 94840 CATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGG 94899
| ||| | ||||| ||||| || || | ||||| |||| ||||| || || ||
Sbjct 597844 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 597785
Query 94900 AATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGAC 94959
||| || || ||||| | ||| || ||||||||| | ||| ||||| | | |||||
Sbjct 597784 AATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGAC 597725
Query 94960 GTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | ||| || || || || || || || || || ||||| |||||
Sbjct 597724 CTCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 597677
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||||| || || ||||| || | ||| |||||| | ||| | |||||
Sbjct 597430 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 597371
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
||||| || || | ||||| |||| ||||| || || ||||| || || ||||| |
Sbjct 597370 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 597311
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
||| || ||||||||| | ||| ||||| | | ||||| || | ||| || || ||
Sbjct 597310 AATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACCTCGAGCGTAATCGTCTT 597251
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || || || ||||| |||||
Sbjct 597250 GCCGGTCAGGGTCTTGACGAAGATTTGCAT 597221
Score = 100 bits (110), Expect = 3e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||||| || || ||||| || | ||| |||||| | ||| | |||||
Sbjct 596974 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 596915
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
||||| || || | ||||| |||| ||||| || || ||||| || || ||||| |
Sbjct 596914 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 596855
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
||| || ||||||||| | ||| || || | | ||||| || | ||||| || ||
Sbjct 596854 AATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACCTCGAGTGTGATCGTCTT 596795
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || || ||||| || |||||
Sbjct 596794 GCCGGTCAGGGTCTTGACAAAAATTTGCAT 596765
Score = 100 bits (110), Expect = 3e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||||| || || ||||| || | ||| |||||| | ||| | |||||
Sbjct 597658 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 597599
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
||||| || || | ||||| |||| ||||| || || ||||| || || ||||| |
Sbjct 597598 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 597539
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
||| || ||||||||| | ||| || || | | ||||| || | ||||| || ||
Sbjct 597538 AATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACCTCGAGTGTGATCGTCTT 597479
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || | || || |||||||| |||||
Sbjct 597478 GCCGGTCAAGGTCTTGACAAAGATTTGCAT 597449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448290325832160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |