Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq73 172 9e-39
seq65 154 2e-33
>seq73
Length=1807266
Score = 172 bits (190), Expect = 9e-39
Identities = 158/200 (79%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516
|| || |||||||| || ||||||||||| |||||||| ||||| ||||||||||||||
Sbjct 816779 CGCGACAACATCCAGGGTATCACCAAGCCCGCTATCCGCCGTCTCGCTCGTCGTGGTGGT 816838
Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576
||||||||| |||| || ||| |||| ||||||| ||| | ||| | ||||||||||||
Sbjct 816839 GTCAAGCGTATCTCCGGCTTGATCTACGAAGAGACTCGAGGTGTCCTCAAGATCTTCCTC 816898
Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636
||| ||| |||| ||| | || ||| || |||||||| || || ||||| |||||
Sbjct 816899 GAGAACGTCATCCGTGACTCGGTCACCTACACAGAGCACGCCAAGCGCAAGACCGTCACT 816958
Query 16637 TCCATGGATATCGTCTATGC 16656
|| | ||| | ||||| ||
Sbjct 816959 TCGCTCGATGTGGTCTACGC 816978
Score = 168 bits (186), Expect = 1e-37
Identities = 179/236 (76%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516
|| || |||||||| || ||||||||||| || || || ||||| || |||||||||||
Sbjct 226718 CGTGACAACATCCAGGGTATCACCAAGCCCGCCATTCGCCGTCTCGCACGTCGTGGTGGT 226777
Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576
|| |||||| |||| || || |||| ||||||| |||| ||| | ||||||||||||
Sbjct 226778 GTGAAGCGTATCTCGGGCCTGATCTACGAAGAGACCCGTGGTGTGCTCAAGATCTTCCTC 226837
Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636
||| ||| |||| ||| | || ||| ||||||||||| || || ||||| ||||||
Sbjct 226838 GAGAACGTGATCCGTGACTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACC 226897
Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692
|| | ||| ||||||| || |||| || ||||| | | | || ||||| ||
Sbjct 226898 TCGCTCGATGTCGTCTACGCCCTGAAGCGATCCGGCCGAACGCTCTACGGTTTCGG 226953
Score = 165 bits (182), Expect = 1e-36
Identities = 178/236 (75%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516
|| || |||||||| || ||||||||||| || || || ||||| || |||||||||||
Sbjct 317523 CGTGACAACATCCAGGGTATCACCAAGCCCGCCATTCGCCGTCTCGCACGTCGTGGTGGT 317464
Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576
|| |||||| |||| || || |||| ||||||| |||| ||| | ||||||||||||
Sbjct 317463 GTGAAGCGTATCTCGGGCCTGATCTACGAAGAGACCCGTGGTGTGCTCAAGATCTTCCTC 317404
Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636
||| ||| |||| ||| | || ||| ||||||||||| || || ||||| ||||||
Sbjct 317403 GAGAACGTGATCCGTGACTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACC 317344
Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692
|| | ||| ||||||| || | || || ||||| | | | || ||||| ||
Sbjct 317343 TCGCTCGATGTCGTCTACGCCCTAAAGCGATCCGGCCGAACGCTCTACGGTTTCGG 317288
>seq65
Length=2871421
Score = 154 bits (170), Expect = 2e-33
Identities = 154/200 (77%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516
|| ||||||||||| || ||||||||||| || || || ||||| || |||||||||||
Sbjct 2177628 CGTGATAACATCCAGGGTATCACCAAGCCCGCCATTCGCCGTCTCGCGCGTCGTGGTGGT 2177569
Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576
||||||||| |||| || | |||| || |||| ||| | ||| | ||||||||||||
Sbjct 2177568 GTCAAGCGTATCTCGGGCCTCATCTACGAGGAGACTCGAGGTGTGCTCAAGATCTTCCTC 2177509
Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636
||| |||||||| ||| | || ||| ||||| ||||| || || ||||| ||||||
Sbjct 2177508 GAGAACGTTATCCGTGACTCGGTCACCTACACCGAACACGCCAAGCGCAAGACGGTCACC 2177449
Query 16637 TCCATGGATATCGTCTATGC 16656
|| | || | ||||| ||
Sbjct 2177448 TCGCTCGACGTTGTCTACGC 2177429
Score = 154 bits (170), Expect = 2e-33
Identities = 154/200 (77%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516
|| ||||||||||| || ||||||||||| || || || ||||| || |||||||||||
Sbjct 2226590 CGTGATAACATCCAGGGTATCACCAAGCCCGCCATTCGCCGTCTCGCGCGTCGTGGTGGT 2226649
Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576
||||||||| |||| || | |||| || |||| ||| | ||| | ||||||||||||
Sbjct 2226650 GTCAAGCGTATCTCGGGCCTCATCTACGAGGAGACTCGAGGTGTGCTCAAGATCTTCCTC 2226709
Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636
||| |||||||| ||| | || ||| ||||| ||||| || || ||||| ||||||
Sbjct 2226710 GAGAACGTTATCCGTGACTCGGTCACCTACACCGAACACGCCAAGCGCAAGACGGTCACC 2226769
Query 16637 TCCATGGATATCGTCTATGC 16656
|| | || | ||||| ||
Sbjct 2226770 TCGCTCGACGTTGTCTACGC 2226789
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075057368108
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |