Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq73 172 9e-39 seq65 154 2e-33 >seq73 Length=1807266 Score = 172 bits (190), Expect = 9e-39 Identities = 158/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| |||||||| ||||| |||||||||||||| Sbjct 816779 CGCGACAACATCCAGGGTATCACCAAGCCCGCTATCCGCCGTCTCGCTCGTCGTGGTGGT 816838 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || ||| |||| ||||||| ||| | ||| | |||||||||||| Sbjct 816839 GTCAAGCGTATCTCCGGCTTGATCTACGAAGAGACTCGAGGTGTCCTCAAGATCTTCCTC 816898 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| ||| | || ||| || |||||||| || || ||||| ||||| Sbjct 816899 GAGAACGTCATCCGTGACTCGGTCACCTACACAGAGCACGCCAAGCGCAAGACCGTCACT 816958 Query 16637 TCCATGGATATCGTCTATGC 16656 || | ||| | ||||| || Sbjct 816959 TCGCTCGATGTGGTCTACGC 816978 Score = 168 bits (186), Expect = 1e-37 Identities = 179/236 (76%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| || || || ||||| || ||||||||||| Sbjct 226718 CGTGACAACATCCAGGGTATCACCAAGCCCGCCATTCGCCGTCTCGCACGTCGTGGTGGT 226777 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || |||||| |||| || || |||| ||||||| |||| ||| | |||||||||||| Sbjct 226778 GTGAAGCGTATCTCGGGCCTGATCTACGAAGAGACCCGTGGTGTGCTCAAGATCTTCCTC 226837 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| ||| | || ||| ||||||||||| || || ||||| |||||| Sbjct 226838 GAGAACGTGATCCGTGACTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACC 226897 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || | ||| ||||||| || |||| || ||||| | | | || ||||| || Sbjct 226898 TCGCTCGATGTCGTCTACGCCCTGAAGCGATCCGGCCGAACGCTCTACGGTTTCGG 226953 Score = 165 bits (182), Expect = 1e-36 Identities = 178/236 (75%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| || || || ||||| || ||||||||||| Sbjct 317523 CGTGACAACATCCAGGGTATCACCAAGCCCGCCATTCGCCGTCTCGCACGTCGTGGTGGT 317464 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || |||||| |||| || || |||| ||||||| |||| ||| | |||||||||||| Sbjct 317463 GTGAAGCGTATCTCGGGCCTGATCTACGAAGAGACCCGTGGTGTGCTCAAGATCTTCCTC 317404 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| ||| | || ||| ||||||||||| || || ||||| |||||| Sbjct 317403 GAGAACGTGATCCGTGACTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACC 317344 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || | ||| ||||||| || | || || ||||| | | | || ||||| || Sbjct 317343 TCGCTCGATGTCGTCTACGCCCTAAAGCGATCCGGCCGAACGCTCTACGGTTTCGG 317288 >seq65 Length=2871421 Score = 154 bits (170), Expect = 2e-33 Identities = 154/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||||||||| || ||||||||||| || || || ||||| || ||||||||||| Sbjct 2177628 CGTGATAACATCCAGGGTATCACCAAGCCCGCCATTCGCCGTCTCGCGCGTCGTGGTGGT 2177569 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || | |||| || |||| ||| | ||| | |||||||||||| Sbjct 2177568 GTCAAGCGTATCTCGGGCCTCATCTACGAGGAGACTCGAGGTGTGCTCAAGATCTTCCTC 2177509 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| |||||||| ||| | || ||| ||||| ||||| || || ||||| |||||| Sbjct 2177508 GAGAACGTTATCCGTGACTCGGTCACCTACACCGAACACGCCAAGCGCAAGACGGTCACC 2177449 Query 16637 TCCATGGATATCGTCTATGC 16656 || | || | ||||| || Sbjct 2177448 TCGCTCGACGTTGTCTACGC 2177429 Score = 154 bits (170), Expect = 2e-33 Identities = 154/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||||||||| || ||||||||||| || || || ||||| || ||||||||||| Sbjct 2226590 CGTGATAACATCCAGGGTATCACCAAGCCCGCCATTCGCCGTCTCGCGCGTCGTGGTGGT 2226649 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || | |||| || |||| ||| | ||| | |||||||||||| Sbjct 2226650 GTCAAGCGTATCTCGGGCCTCATCTACGAGGAGACTCGAGGTGTGCTCAAGATCTTCCTC 2226709 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| |||||||| ||| | || ||| ||||| ||||| || || ||||| |||||| Sbjct 2226710 GAGAACGTTATCCGTGACTCGGTCACCTACACCGAACACGCCAAGCGCAAGACGGTCACC 2226769 Query 16637 TCCATGGATATCGTCTATGC 16656 || | || | ||||| || Sbjct 2226770 TCGCTCGACGTTGTCTACGC 2226789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075057368108