Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq88 95.1 1e-14 seq84 86.0 6e-12 >seq88 Length=4649774 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 26771 GCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGA 26830 |||| | || || || ||| | || || || |||||||| |||| | || || ||| Sbjct 184611 GCAAATCTTCGTCAAGACACTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 184670 Query 26831 CACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACA 26890 ||| ||||| | |||||| ||||| ||||| ||||| || || || || || || Sbjct 184671 CACGATCGACAACGTCAAAACCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGCA 184730 Query 26891 AAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACAT 26950 | | ||||| | | |||||| || ||||| |||| | | | | |||||| ||||| Sbjct 184731 ACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACAT 184790 Query 26951 TCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||| || || || |||| ||||||| Sbjct 184791 TCAAAAGGAGTCGACCCTCCACTTGGTCCT 184820 >seq84 Length=1022938 Score = 86.0 bits (94), Expect = 6e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 119655 ACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCATAAACTCGAAA 119714 ||||| || ||||| || || ||||||||||| || || || | |||||||| ||||| Sbjct 126370 ACACGCTTCTCAAAGAAGTTTGTCTTGCCCTCGAGCGAGATCATGTTCATAAAATCGAAG 126311 Query 119715 GGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCGATCTGCCACA 119774 || || | | ||| | |||| || |||||| ||| ||||| || || || ||| Sbjct 126310 GGGTTCTCGGCGTTCCAGACCTTGGGGTTGCCCAAGGCGACCAACAAGCGGTCGGCGACA 126251 Query 119775 AACTCGATGTAT 119786 |||||||||||| Sbjct 126250 AACTCGATGTAT 126239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478661466608320