Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq88 95.1 1e-14
seq84 86.0 6e-12
>seq88
Length=4649774
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 26771 GCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGA 26830
|||| | || || || ||| | || || || |||||||| |||| | || || |||
Sbjct 184611 GCAAATCTTCGTCAAGACACTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 184670
Query 26831 CACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACA 26890
||| ||||| | |||||| ||||| ||||| ||||| || || || || || ||
Sbjct 184671 CACGATCGACAACGTCAAAACCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGCA 184730
Query 26891 AAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACAT 26950
| | ||||| | | |||||| || ||||| |||| | | | | |||||| |||||
Sbjct 184731 ACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACAT 184790
Query 26951 TCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|||||| || || || |||| |||||||
Sbjct 184791 TCAAAAGGAGTCGACCCTCCACTTGGTCCT 184820
>seq84
Length=1022938
Score = 86.0 bits (94), Expect = 6e-12
Identities = 98/132 (74%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 119655 ACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCATAAACTCGAAA 119714
||||| || ||||| || || ||||||||||| || || || | |||||||| |||||
Sbjct 126370 ACACGCTTCTCAAAGAAGTTTGTCTTGCCCTCGAGCGAGATCATGTTCATAAAATCGAAG 126311
Query 119715 GGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCGATCTGCCACA 119774
|| || | | ||| | |||| || |||||| ||| ||||| || || || |||
Sbjct 126310 GGGTTCTCGGCGTTCCAGACCTTGGGGTTGCCCAAGGCGACCAACAAGCGGTCGGCGACA 126251
Query 119775 AACTCGATGTAT 119786
||||||||||||
Sbjct 126250 AACTCGATGTAT 126239
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478661466608320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |