Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq88 212 2e-49
>seq88
Length=4649774
Score = 212 bits (234), Expect = 2e-49
Identities = 508/766 (66%), Gaps = 2/766 (0%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
|| || |||||| |||| || | | ||| || ||||| | | | || ||| | || ||
Sbjct 2234441 TTTACCCACGCCTCGCCGACGCTCTTCAACGCCGGAACGCCTCACCCGCAGCTTTCGTCC 2234500
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
|| || || | | |||||||||||||| || || || |||| ||||| || ||||
Sbjct 2234501 TGTTTCCTGGTCACGATGAAGGACGATTCGATTGAAGGCATCTACGACACGCTCAAGACG 2234560
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC- 363725
||||| || |||||||||| || ||||| || ||| | || || || | || ||
Sbjct 2234561 TGTGCGCTCATTTCCAAGACCGCCGGCGGTATCGGTTTGAGCATTCATAACATCCGCGCG 2234620
Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785
|| | | ||||| ||| || || |||||||| || | || |||||||| ||
Sbjct 2234621 ACCGG-CTCCTACATCGCCGGTACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCG 2234679
Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845
||| | |||| || ||| | ||||||||||| ||||| ||||| || || ||
Sbjct 2234680 TGTCTACAACAACACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCTGGAGCCTT 2234739
Query 363846 TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA 363905
|| || || ||||| || || || || | || ||||| || || || || || ||
Sbjct 2234740 CGCGATCTACCTCGAACCGTGGCACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAA 2234799
Query 363906 CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCA 363965
| || || |||||| | || || |||||||| |||| ||| || ||| || | || |
Sbjct 2234800 CCACGGCAAGGAGGAAGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCGGATCT 2234859
Query 363966 TTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCC 364025
|||||| |||| || ||||| | | ||| | ||||| ||||| |||| ||
Sbjct 2234860 CTTTATGGAGCGTGTCGAGGCCGCCGGCGAGTGGCCCCTCTTCTGCCCCGCCGAAGCCCC 2234919
Query 364026 AGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGA 364085
|| || ||| || | || || || | || || | ||| || || ||| |||
Sbjct 2234920 CGGCCTCCACGAAGTCTATGGCGAAGAGTTCCGCGCCCTGTTCGAGAAATACGAAAAGGA 2234979
Query 364086 GGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCA 364145
||| || ||||| || ||||| || ||||| |||| || || | || | ||
Sbjct 2234980 GGGCCGCGCCAAGAAGACGATCCCCGCGCAAAAGCTTTGGTACGCGATTCTCGAAGCCCA 2235039
Query 364146 GATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCA 364205
| | || || || | || | ||| | ||||| || | ||| || || |||||
Sbjct 2235040 GGTCGAAACCGGCAACCCGTTCATGCTCTACAAGGACGCCGCAAACAAGAAATCGAACCA 2235099
Query 364206 GCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGC 364265
|| ||||||| || || || ||||| || |||||||| ||||| ||| | ||
Sbjct 2235100 AAAGAACCTTGGCACGATCAAGTCCTCGAACCTGTGCACCGAGATCATTGAGTACTCGGC 2235159
Query 364266 TCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCG 364311
||||| ||| ||||| || || | || ||||||||| | |||
Sbjct 2235160 GCCCGATGAGTGCGCCGTCTGCAATTTGGCCTCGATCGCGTTGCCG 2235205
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303350994921992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |