Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq88 212 2e-49 >seq88 Length=4649774 Score = 212 bits (234), Expect = 2e-49 Identities = 508/766 (66%), Gaps = 2/766 (0%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 || || |||||| |||| || | | ||| || ||||| | | | || ||| | || || Sbjct 2234441 TTTACCCACGCCTCGCCGACGCTCTTCAACGCCGGAACGCCTCACCCGCAGCTTTCGTCC 2234500 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 || || || | | |||||||||||||| || || || |||| ||||| || |||| Sbjct 2234501 TGTTTCCTGGTCACGATGAAGGACGATTCGATTGAAGGCATCTACGACACGCTCAAGACG 2234560 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC- 363725 ||||| || |||||||||| || ||||| || ||| | || || || | || || Sbjct 2234561 TGTGCGCTCATTTCCAAGACCGCCGGCGGTATCGGTTTGAGCATTCATAACATCCGCGCG 2234620 Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785 || | | ||||| ||| || || |||||||| || | || |||||||| || Sbjct 2234621 ACCGG-CTCCTACATCGCCGGTACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCG 2234679 Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845 ||| | |||| || ||| | ||||||||||| ||||| ||||| || || || Sbjct 2234680 TGTCTACAACAACACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCTGGAGCCTT 2234739 Query 363846 TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA 363905 || || || ||||| || || || || | || ||||| || || || || || || Sbjct 2234740 CGCGATCTACCTCGAACCGTGGCACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAA 2234799 Query 363906 CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCA 363965 | || || |||||| | || || |||||||| |||| ||| || ||| || | || | Sbjct 2234800 CCACGGCAAGGAGGAAGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCGGATCT 2234859 Query 363966 TTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCC 364025 |||||| |||| || ||||| | | ||| | ||||| ||||| |||| || Sbjct 2234860 CTTTATGGAGCGTGTCGAGGCCGCCGGCGAGTGGCCCCTCTTCTGCCCCGCCGAAGCCCC 2234919 Query 364026 AGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGA 364085 || || ||| || | || || || | || || | ||| || || ||| ||| Sbjct 2234920 CGGCCTCCACGAAGTCTATGGCGAAGAGTTCCGCGCCCTGTTCGAGAAATACGAAAAGGA 2234979 Query 364086 GGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCA 364145 ||| || ||||| || ||||| || ||||| |||| || || | || | || Sbjct 2234980 GGGCCGCGCCAAGAAGACGATCCCCGCGCAAAAGCTTTGGTACGCGATTCTCGAAGCCCA 2235039 Query 364146 GATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCA 364205 | | || || || | || | ||| | ||||| || | ||| || || ||||| Sbjct 2235040 GGTCGAAACCGGCAACCCGTTCATGCTCTACAAGGACGCCGCAAACAAGAAATCGAACCA 2235099 Query 364206 GCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGC 364265 || ||||||| || || || ||||| || |||||||| ||||| ||| | || Sbjct 2235100 AAAGAACCTTGGCACGATCAAGTCCTCGAACCTGTGCACCGAGATCATTGAGTACTCGGC 2235159 Query 364266 TCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCG 364311 ||||| ||| ||||| || || | || ||||||||| | ||| Sbjct 2235160 GCCCGATGAGTGCGCCGTCTGCAATTTGGCCTCGATCGCGTTGCCG 2235205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303350994921992