Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq73 147 2e-30 seq88 132 5e-26 seq61 125 7e-24 >seq73 Length=1807266 Score = 147 bits (162), Expect = 2e-30 Identities = 168/226 (74%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| || || | ||||||||||||||| |||||||| ||| | Sbjct 313159 CCACCACGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 313100 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| || |||| | ||| |||||||| || ||| Sbjct 313099 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGG 313040 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| ||| || ||||| | || | ||||||| ||||||| Sbjct 313039 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTATCGGACGACTCGACC 312980 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCA 131233 |||| ||| | ||| || || || || || || || || || |||| Sbjct 312979 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 312934 >seq88 Length=4649774 Score = 132 bits (146), Expect = 5e-26 Identities = 570/876 (65%), Gaps = 29/876 (3%) Strand=Plus/Minus Query 145625 GCGATCGACGCCAAATTACAAACTGCCGTCTCCTCGG-CGTCGCTGTATTGTACGATCTC 145683 |||||||| |||||||| || || || ||| |||| || || ||| | | |||||| Sbjct 2235198 GCGATCGAGGCCAAATTGCAGACGGCGCACTCATCGGGCGCCGA-GTACTCAATGATCTC 2235140 Query 145684 GGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCA 145743 || ||||| || | ||||| || || || || | || || |||| |||| Sbjct 2235139 GGTGCACAGGTTCGAGGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGC 2235080 Query 145744 CGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACG 145803 |||||||||||||||||| |||| ||| || || ||||| | || || || Sbjct 2235079 GGCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTC---GAGAATCGC 2235023 Query 145804 GTGC--AAG-TCCTGCGCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCT 145860 || | ||| | ||||| | | | || || | ||||||||| | |||||||||| Sbjct 2235022 GTACCAAAGCTTTTGCGCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTC 2234963 Query 145861 GTAGAGCTCCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACA 145920 | | || | ||| | || ||| ||| |||||||| | | ||| || Sbjct 2234962 GAACAGGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCA 2234903 Query 145921 CATCAGCGACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAG 145980 | || | ||| ||||| ||| | ||| ||||||||||| | ||| || | ||| || Sbjct 2234902 GAAGAGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATAAAGAGATCCGGAATCCAGAG 2234843 Query 145981 CGCGTACATCAAGTCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATT--A 146038 ||| | | | || || || | ||||| || || ||| || | | Sbjct 2234842 CGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCG-TGGTTCTTGCGAAGGTCCA 2234784 Query 146039 AGCACACTATAGATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG- 146097 | || | | ||| ||| |||||||||||||| | |||| |||| |||||| || Sbjct 2234783 GGAACTCGA-AGACGTCAGCGTGCCACGGTTCGAGGTAGATCGCGAAGGCTCCAGGACGC 2234725 Query 146098 --TTTGCCACCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCG 146155 |||||||| ||||| |||| || | ||||||| |||| || | |||||| || Sbjct 2234724 TTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACG 2234665 Query 146156 ACGCCGCTGGCTACGCCGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGA 146215 | |||| | | |||||||||| | || || |||| | ||| | | |||| Sbjct 2234664 ATGCCGTTCGAGTAGCCGTTCGTACCGGCGATGTAGGAGCCGGTCGCGCGGATGTTATGA 2234605 Query 146216 ACATTCACGCCGAGACCGCCGCCGTACTTGGATAT-AGCGGCGCA-GTCGCCGAGCGTCT 146273 | ||| |||| ||||||| || |||||| || ||| || || ||| |||||| | Sbjct 2234604 ATGCTCAAACCGATACCGCCGGCGGTCTTGGAAATGAGC-GCACACGTC-TTGAGCGTGT 2234547 Query 146274 CGTAGATGCCGTCAATGCTATCG--CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTG 146331 |||||||||| ||||| |||| |||| || || ||| || || || | | ||| Sbjct 2234546 CGTAGATGCCTTCAATCGAATCGTCCTTC--ATCGTGACCAGGAAACAGGACGAAAGCTG 2234489 Query 146332 CGCCATCGGCGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAA-CATTTTTCGGC 146390 || ||||| || || ||| | |||||| ||||| ||||| | |||| Sbjct 2234488 CGGGTGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGG- 2234430 Query 146391 TCATCATCCGATACG-TTTCGATA-GCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGC 146448 ||| | |||| | | | | ||| || | ||||||| || || ||||| | || Sbjct 2234429 ACATGAGGTTGTACGACTGCAAGACGCG-CTCG-ATGTCGTGACCGTGGATGCCGACGGC 2234372 Query 146449 GACGCGCATGAGCATGTGTTGGGGCCGCTCCGCCAC 146484 |||||||||||||||||| || || || || || || Sbjct 2234371 GACGCGCATGAGCATGTGCTGCGGTCGTTCGGCGAC 2234336 Score = 131 bits (144), Expect = 2e-25 Identities = 170/234 (73%), Gaps = 1/234 (0%) Strand=Plus/Minus Query 131003 ATGA-GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAA 131061 |||| |||||| || | || || || || || | |||||||||||||||||||||||| Sbjct 184841 ATGATGCCACCTCGGAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAG 184782 Query 131062 TCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCC 131121 ||| || |||||| ||||| ||||||||||| || |||| | ||| |||||||| Sbjct 184781 TCGGCCAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCT 184722 Query 131122 GGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGAC 131181 || ||||| ||||| ||||| ||| || |||| | || | || |||| ||| Sbjct 184721 GGCGGGATGCCTTCCTTGTCTTGGATCTTGGTTTTGACGTTGTCGATCGTGTCGGACGAC 184662 Query 131182 TCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| |||| ||| | || || || || || || || ||||| || ||| || Sbjct 184661 TCGACCTCGAGGGTGATCGTCTTGCCCGTAAGTGTCTTGACGAAGATTTGCCTG 184608 >seq61 Length=3738257 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || ||||| || || | ||||||||||| || |||||||||||| Sbjct 597219 CCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 597160 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| ||| |||| || ||||||||||| || || Sbjct 597159 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGA 597100 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||||| ||||| | || | ||||| | ||| |||| Sbjct 597099 ATGCCCTCCTTGTCCTGAATTTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACC 597040 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| || || ||||| || || || || || || ||||| Sbjct 597039 TCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 596993 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || ||||| || || | ||||||||||| || |||||||||||| Sbjct 596991 CCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 596932 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| ||| |||| || ||||||||||| || || Sbjct 596931 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGA 596872 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | ||||| | ||| |||| Sbjct 596871 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACC 596812 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || ||||| || || || || ||||| ||||| Sbjct 596811 TCGAGTGTGATCGTCTTGCCGGTCAGGGTCTTGACAAAAATTTGCAT 596765 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || ||||| || || | ||||||||||| || |||||||||||| Sbjct 597447 CCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 597388 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| ||| |||| || ||||||||||| || || Sbjct 597387 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGA 597328 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | || || | ||| |||| Sbjct 597327 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACC 597268 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| || || ||||| || || || ||||| || ||||| Sbjct 597267 TCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 597221 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| ||||| || || | ||||||||||| || |||||||||||| Sbjct 597903 CCCCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 597844 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| ||| |||| || ||||||||||| || || Sbjct 597843 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGA 597784 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | || || | ||| |||| Sbjct 597783 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACC 597724 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| || || ||||| || || || ||||| || ||||| Sbjct 597723 TCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 597677 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || ||||| || || | ||||||||||| || |||||||||||| Sbjct 872069 CCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 872010 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| ||| |||| || ||||||||||| || ||| Sbjct 872009 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGG 871950 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | || || | ||||||| Sbjct 871949 ATACCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACC 871890 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || || || || || || || || |||||||| Sbjct 871889 TCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 871843 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || ||||| || || | ||||||||||| || |||||||||||| Sbjct 597675 CCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 597616 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| ||| |||| || ||||||||||| || || Sbjct 597615 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGA 597556 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | ||||| | ||| |||| Sbjct 597555 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACC 597496 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || ||||| | || || || || || ||||| Sbjct 597495 TCGAGTGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 597449 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| || || | ||||||||||| || || ||||| ||| Sbjct 872297 CCACCACGAAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGCG 872238 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| || |||| || ||||||||||| || || Sbjct 872237 AGCGTGCGACCGTCCTCGAGCTGCTTGCCCGCAAAGATCAATCGCTGCTGGTCGGGGGGA 872178 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| || ||||| | || | ||||| | ||| |||| Sbjct 872177 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACC 872118 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| || || ||||| || || || || || || ||||| Sbjct 872117 TCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 872071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472011879575040