Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq73 113 4e-20
seq88 104 2e-17
>seq73
Length=1807266
Score = 113 bits (124), Expect = 4e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055
||| ||||||| ||||| ||||| | || || || ||||||| |||| || ||||||
Sbjct 312930 ACAGTGCAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCG 312989
Query 25056 TCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|| || || ||||| | ||| || ||| ||||| ||||| || || || |||
Sbjct 312990 TCCGATACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCCCCAGAC 313049
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|| || || | || ||||||||||| || | || |||| ||||| ||| ||| |||
Sbjct 313050 CAGCAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTAC 313109
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || ||||| || || || || || || |||||
Sbjct 313110 AACATCCAAAAGGAGTCGACCCTCCACTTGGTGCT 313144
>seq88
Length=4649774
Score = 104 bits (114), Expect = 2e-17
Identities = 157/221 (71%), Gaps = 8/221 (4%)
Strand=Plus/Plus
Query 24994 GAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGT 25053
|||| | |||||| || || ||||| | || || || | ||||| |||| || ||||
Sbjct 184604 GAACCAGGCAAATCTTCGTCAAGACACTTACGGGCAAGACGATCACCCTCGAGGTCGAGT 184663
Query 25054 CGTCTGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCA 25109
|||| ||||| ||||| |||| || ||| | || ||||| ||||| || ||
Sbjct 184664 CGTCCGACACGATCGACAACGTCAA--AACCAAGA--TCCAAGACAAGGAAGGCATCCCG 184719
Query 25110 CCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGC 25169
|| ||||| || || | || ||||||||||| || | || |||| ||||| ||| |
Sbjct 184720 CCAGACCAGCAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCC 184779
Query 25170 GATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| ||||| |||||||| || || || || || || || ||
Sbjct 184780 GACTACAACATTCAAAAGGAGTCGACCCTCCACTTGGTCCT 184820
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327176135140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |