Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq88 340 3e-88
seq84 120 6e-22
>seq88
Length=4649774
Score = 340 bits (376), Expect = 3e-88
Identities = 843/1265 (67%), Gaps = 32/1265 (3%)
Strand=Plus/Minus
Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCG 244450
|||| ||||||| |||||||||||||||||| |||||| | | ||| |||| |
Sbjct 2235468 TCGATCGCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTGAGCTTGCGCGCCTCGGGC 2235409
Query 244451 CAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510
| ||| || || ||| |||||| ||||||| || || ||||| |||||||||
Sbjct 2235408 GAATCGAACGGCATCGCCAATGCCATGAACGCGTCGGCGAGCCCTTGCACTCCGATGCCG 2235349
Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCG 244570
||||| | ||| || ||||||| | || ||| ||||| || ||||| |||||
Sbjct 2235348 ATGGGGCGGTGGCGGAAGTTGGAGTACTGCGCCTCGATGACGGGATAGTAGTTGACGTCG 2235289
Query 244571 ATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCG 244630
|| | ||| | |||| | || | |||||| ||| || | || ||||||
Sbjct 2235288 ATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAACTTCTTGAAGTCG 2235229
Query 244631 TACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCC 244690
|| || | | || || | | ||| ||| || | ||| ||||
Sbjct 2235228 CACACGCCG---TTCT------TGATAAAGCTCGGCAACGCGAT-----CGA----GGCC 2235187
Query 244691 AGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTA 244750
| ||||||||||| ||| || | | ||||| | ||||||||||| |||||
Sbjct 2235186 AAATTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCAATGATCTCGGTGCACAGGTTC 2235127
Query 244751 CTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAG 244810
| ||||||| ||||| |||| || || || || || ||| |||||||||||||
Sbjct 2235126 GAGGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCGGCGTCCTTGTAG 2235067
Query 244811 AGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTCCCT 244869
|||||||| || ||||| |||| |||||| |||| | ||| || ||| || |
Sbjct 2235066 AGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCGAGAATCGC-GTACCAAAGCTTTTG 2235008
Query 244870 AGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAA 244929
|| || |||| | || |||||| ||||| | ||||||| |||
Sbjct 2235007 CGCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAACAGGGCGCGGAA 2234948
Query 244930 CTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTC 244989
||| ||| |||| |||| ||||||||| || ||||| | ||| ||||||
Sbjct 2234947 CTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAAGAGGGGCCACTC 2234888
Query 244990 GCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTC 245049
|||| || ||| ||| | || ||| ||||| || || |||||||| || |||||| ||
Sbjct 2234887 GCCGGCGGCCTCGACACGCTCCATAAAGAGATCCGGAATCCAGAGCGCAAAGAAGAGATC 2234828
Query 245050 CCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTC 245109
| | | || ||| ||| |||||| | || |||| || || ||||||||
Sbjct 2234827 ACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTC 2234768
Query 245110 GACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTC 245169
||||||| || || | ||||| |||| ||| || || ||||||||||| || |||||
Sbjct 2234767 AGCGTGCCACGGTTCGAGGTAGATCGCGAAGGCTCCAGGACGCTTGTTGCCACCTTGGTC 2234708
Query 245170 CACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCC 245229
|| | | || |||| ||| || || | || || |||||||| |||| |||
Sbjct 2234707 GACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCC 2234648
Query 245230 GTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCC 245289
||| || || |||||||| ||| | | | || ||| ||| || || | ||
Sbjct 2234647 GTTCGTACCGGCGATGTAGGAGCCGGTCGCGCGGATGTTATGAATGCTCAAACCGATACC 2234588
Query 245290 GCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCT 245349
||||||| |||||| ||||| || || |||||| ||||| ||||| || ||
Sbjct 2234587 GCCGGCGGTCTTGGAAATGAGCGCACACGTCTTGAGCGTGTCGTAGATGCCTTCAATCGA 2234528
Query 245350 GTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTT 245409
|| |||||| ||| ||| || ||||| || ||||| || | || | | | |||
Sbjct 2234527 ATCGTCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTT 2234468
Query 245410 GAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTC-GAGAGGAACCCGTACGTCTGGA 245468
||| || || || ||||||||||||||||| |||| || | || ||||| ||| |
Sbjct 2234467 GAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGC-GCTCGGACATGAGGTTGTACGACTGCA 2234409
Query 245469 GCAGA-GCG-TCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTG 245526
||| ||| ||||||| || |||||||| | |||| | |||||| |||||||
Sbjct 2234408 --AGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCATGTGCTG 2234351
Query 245527 -GGGCGTCTCGATGGGTCCCTCGGGTCCCT--TGAGCATGTAGGAGCGCTCGAGCGTCTT 245583
|| ||| ||| | | || | ||| | |||| |||||||||||||||||| ||
Sbjct 2234350 CGGTCGT-TCG--GCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGCGTTTT 2234294
Query 245584 GAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAGTCTCTC 245643
||| |||||||| ||||||||| ||| || || | ||||| || ||| | ||
Sbjct 2234293 GAAGCCAAAGTAGTTGTAGCCAAAATCGCGGTCGTAGATAACGGCGCTGTTGAGGCGGTC 2234234
Query 245644 GGCGT 245648
|||||
Sbjct 2234233 GGCGT 2234229
>seq84
Length=1022938
Score = 120 bits (132), Expect = 6e-22
Identities = 188/263 (71%), Gaps = 11/263 (4%)
Strand=Plus/Plus
Query 42744 GGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTC 42803
||| | || || |||||||||||||||||| || | | |||||||||| | ||||||
Sbjct 125909 GGCTCGTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTC 125968
Query 42804 TCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTC 42863
|| ||||| |||||| | |||||||| || || | |||||||| ||||| |||||
Sbjct 125969 TCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCACACCGACTTTGCTTGCCTTTTGTTC 126028
Query 42864 TCGAGCCACCTCAGGCACAAGCCCTC-GAAGGAGCGGGTCCGGGCCATCATCACGGAGGC 42922
|| ||||||| || ||| |||| || ||| | |||||||| ||||||
Sbjct 126029 TC---CCACCTCGAGC-GAAGACCTCACCCAGATACCGTCGCGCTCATCATCAAGGAGGC 126084
Query 42923 CGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCC---CGTGTCCCTGGTCGGCAT 42979
||| || ||||||||||| ||| | || || | || || || || || |||| ||
Sbjct 126085 CGTCGAAATCGAGAAGGAATTCTTGACCGAGGCTCTTCCTTGCG-GT--TTGATCGGTAT 126141
Query 42980 GAACCACGACCTCATGTGCAAGT 43002
||| | | ||||||||| |||
Sbjct 126142 GAATGCCAAGCTCATGTGCCAGT 126164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944337358538560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |