Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq61 140 8e-28
seq73 120 7e-22
seq88 109 1e-18
seq102 107 5e-18
>seq61
Length=3738257
Score = 140 bits (154), Expect = 8e-28
Identities = 148/194 (76%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || |||||||| ||||||||||||||||| ||||| || | || || || || |||
Sbjct 872261 TCCTTCTGGATATTGTAGTCGGCGAGCGTGCGACCGTCCTCGAGCTGCTTGCCCGCAAAG 872202
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|||| ||||| || || ||| || || || ||||||||||| || || || |||
Sbjct 872201 ATCAATCGCTGCTGG---TCGGGGGGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACG 872145
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | ||| ||||| || |||||||| |||||||| |||||||| ||||||
Sbjct 872144 TTGTCGATCGTATCCGAGGATTCGACCTCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTG 872085
Query 288460 ACGAATATCTGCAT 288473
|| || || |||||
Sbjct 872084 ACAAAGATTTGCAT 872071
Score = 136 bits (150), Expect = 9e-27
Identities = 169/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| || | || | ||| || || ||||| || || ||||||
Sbjct 597219 CCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 597160
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|||||||| ||||| || | || || || |||||||||| ||||| || || |||
Sbjct 597159 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTG---GTCGGGG 597103
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || ||||| ||||| || || ||||| || || | ||| |||||
Sbjct 597102 GGAATGCCCTCCTTGTCCTGAATTTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCG 597043
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| |||||||| |||||||| |||||||| |||||||| || || |||||
Sbjct 597042 ACCTCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 596993
Score = 132 bits (146), Expect = 1e-25
Identities = 168/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| || | || | ||| || || ||||| || || ||||||
Sbjct 596991 CCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 596932
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|||||||| ||||| || | || || || |||||||||| ||||| || || |||
Sbjct 596931 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGG---TCGGGG 596875
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || ||||| || || || || ||||| || || | ||| |||||
Sbjct 596874 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCG 596815
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| ||||||||||| |||||||| |||||||| || || |||||
Sbjct 596814 ACCTCGAGTGTGATCGTCTTGCCGGTCAGGGTCTTGACAAAAATTTGCAT 596765
Score = 132 bits (146), Expect = 1e-25
Identities = 168/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| || | || | ||| || || ||||| || || ||||||
Sbjct 597447 CCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 597388
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|||||||| ||||| || | || || || |||||||||| ||||| || || |||
Sbjct 597387 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGG---TCGGGG 597331
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || ||||| || || || || ||||| || || | || |||||
Sbjct 597330 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCG 597271
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| |||||||| |||||||| |||||||| ||||||||||| || |||||
Sbjct 597270 ACCTCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 597221
Score = 129 bits (142), Expect = 1e-24
Identities = 169/233 (73%), Gaps = 6/233 (3%)
Strand=Plus/Minus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
||||| || ||||| | || || | || | ||| || || ||||| || || |||
Sbjct 597906 TGTCCCCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCG 597847
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
||||||||||| ||||| || | || || || |||||||||| ||||| || ||
Sbjct 597846 GCGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGG---TCG 597790
Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420
||| || || || || ||||| || || || || ||||| || || | || |||
Sbjct 597789 GGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGAT 597730
Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || |||||||| |||||||| |||||||| ||||||||||| || |||||
Sbjct 597729 TCGACCTCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 597677
Score = 127 bits (140), Expect = 5e-24
Identities = 167/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| || | || | ||| || || ||||| || || ||||||
Sbjct 597675 CCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 597616
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|||||||| ||||| || | || || || |||||||||| ||||| || || |||
Sbjct 597615 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGG---TCGGGG 597559
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || ||||| || || || || ||||| || || | ||| |||||
Sbjct 597558 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCG 597499
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| ||||||||||| ||||||| |||||||| || || |||||
Sbjct 597498 ACCTCGAGTGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 597449
Score = 122 bits (134), Expect = 2e-22
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| || | || | ||| || || ||||| || || ||||||
Sbjct 872069 CCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 872010
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|||||||| ||||| || | || || || |||||||||| ||||| || |||
Sbjct 872009 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGG 871950
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || || || || || | || ||||| || || | || ||| || ||
Sbjct 871949 ATACCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACC 871890
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||||||||||||||| || || || |||||||| || ||||||||
Sbjct 871889 TCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 871843
>seq73
Length=1807266
Score = 120 bits (132), Expect = 7e-22
Identities = 143/193 (74%), Gaps = 6/193 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| |||||||| || |||||||| | ||||| || || || | || || || || |||
Sbjct 313123 TCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAG 313064
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| ||||| || || |||||| |||||||| || |||||||| || || || |||
Sbjct 313063 ATGAGACGTTGCTGG---TCTGGGGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACG 313007
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | |||| ||| || || ||||| ||||| ||||| || || || ||||||
Sbjct 313006 TTGTCGATCGTATCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTG 312947
Query 288460 ACGAATATCTGCA 288472
|| || || ||||
Sbjct 312946 ACAAAGATTTGCA 312934
>seq88
Length=4649774
Score = 109 bits (120), Expect = 1e-18
Identities = 140/192 (73%), Gaps = 6/192 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| ||||| || || |||||||| | ||||| || || || | || || || || |||
Sbjct 184799 TCCTTTTGAATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAG 184740
Query 288343 ATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| ||||| || || ||||| ||| ||||| || || ||||| || | ||| |||
Sbjct 184739 ATGAGACGTTGCTGG---TCTGGCGGGATGCCTTCCTTGTCTTGGATCTTGGTTTTGACG 184683
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | ||| ||| || || ||||| ||||||||||| || || || ||||||
Sbjct 184682 TTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGTGTCTTG 184623
Query 288460 ACGAATATCTGC 288471
||||| || |||
Sbjct 184622 ACGAAGATTTGC 184611
>seq102
Length=717467
Score = 107 bits (118), Expect = 5e-18
Identities = 258/385 (67%), Gaps = 8/385 (2%)
Strand=Plus/Plus
Query 72416 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 72475
|||||| || | || |||||||| || || || || | ||||| | || | ||
Sbjct 83573 CCAAGCCTCGACCTCCGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAATCCGAGACGAC 83632
Query 72476 TCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 72535
|| || || ||||| |||||||| ||||| ||||||||||| | |||||| ||
Sbjct 83633 GCCCTTCTACCCTCGTTCGCCTTACGGCGTTGCCAAGTTGTACGCCTTCTGGATCGTCAA 83692
Query 72536 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAG 72595
|| ||||| |||||||| ||||||| | |||||| || | ||||| ||| |||
Sbjct 83693 GAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCTTGTTCAACCAC--GAG 83750
Query 72596 TCCCAAC--AGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATT 72653
|||| | | || | ||||| || | |||||| || | ||||| | | |
Sbjct 83751 TCCCCGCGTCGTGGTCGCACCTTCGTCACGAGGAAAATCTCGCGAGCTGTCGCCGAGA-T 83809
Query 72654 TTCAATGGTGTCGAAA--AATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGG 72711
|| | | ||| | | | ||| | || ||||| || | || ||||| | || ||||
Sbjct 83810 CTCGCTCG-GTCAACAGGACTGCCTCTACCTCGGCAACTTGGAGGCCAAGCGTGACTGGG 83868
Query 72712 GATATGCGAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACAAGATACTCCGGATG 72771
|| | || || ||||| || | |||||| |||||||||| ||||| || || || |
Sbjct 83869 GACACGCACGCGACTACGTGGAGGGTATGTGGATGATGCTGCAGCAAGACACCCCCGACG 83928
Query 72772 ACTATGTGATTGCAACAGGGAAAAC 72796
||| ||| | || || || ||||
Sbjct 83929 ACTTTGTCCTCGCGACGGGCGAAAC 83953
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179652042165768
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