Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq61 140 4e-28
seq88 116 4e-21
seq73 116 4e-21
>seq61
Length=3738257
Score = 140 bits (154), Expect = 4e-28
Identities = 172/230 (75%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| |||| | || | |||||| |||| || |||||| || || |||||||| ||
Sbjct 872070 ACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 872011
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || || |||| || |||||||| || ||||| || | |||||||||||||| ||
Sbjct 872010 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 871951
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCG-CCACCGTGTCGCTCGATTCC 42158
| | |||||||| | ||| | || || |||| ||| | | | |||||| ||| ||
Sbjct 871950 GATACCCTCCTTGT-CTTGAATCTTGGTCTTGA-CGTTGTCAATCGTGTCCGACGACTCG 871893
Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| |||| |||||| || |||||||| |||||||| |||||||| |||||
Sbjct 871892 ACCTCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 871843
Score = 134 bits (148), Expect = 1e-26
Identities = 171/230 (74%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| |||| | || | |||||| |||| || |||||| || || |||||||| ||
Sbjct 597220 ACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 597161
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || || |||| || |||||||| || ||||| || | |||||||||||||| ||
Sbjct 597160 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 597101
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 42158
| || |||||||||| ||| |||| | |||| ||| | | | ||| || |||||
Sbjct 597100 AATGCCCTCCTTGTCC-TGAATTTTGGCCTTGA-CGTTGTCGATCGTATCCGAGGATTCG 597043
Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| |||| ||| || || ||||| || || ||||| ||||||||||||||
Sbjct 597042 ACCTCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 596993
Score = 132 bits (146), Expect = 5e-26
Identities = 170/229 (74%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|| |||| | ||| | |||||| |||| || |||||| || || |||||||| ||
Sbjct 597903 CCCCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 597844
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
|| || || |||| || |||||||| || ||||| || | |||||||||||||| ||
Sbjct 597843 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGA 597784
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159
| || |||||||||| ||| | || | |||| ||| | | | |||||| ||||| |
Sbjct 597783 ATGCCCTCCTTGTCC-TGAATCTTGGCCTTGA-CGTTGTCGATCGTGTCTGAGGATTCGA 597726
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| |||| ||| || || ||||| || || ||||| || |||||||||||
Sbjct 597725 CCTCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 597677
Score = 131 bits (144), Expect = 2e-25
Identities = 170/230 (74%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| |||| | || | |||||| |||| || |||||| || || |||||||| ||
Sbjct 597448 ACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 597389
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || || |||| || |||||||| || ||||| || | |||||||||||||| ||
Sbjct 597388 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 597329
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 42158
| || |||||||||| ||| | || | |||| ||| | | | |||||| |||||
Sbjct 597328 AATGCCCTCCTTGTCC-TGAATCTTGGCCTTGA-CGTTGTCGATCGTGTCTGAGGATTCG 597271
Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| |||| ||| || || ||||| || || ||||| || |||||||||||
Sbjct 597270 ACCTCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 597221
Score = 125 bits (138), Expect = 8e-24
Identities = 169/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| |||| | || | |||||| |||| || |||||| || || |||||||| ||
Sbjct 596992 ACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 596933
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || || |||| || |||||||| || ||||| || | |||||||||||||| ||
Sbjct 596932 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 596873
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 42158
| || |||||||||| ||| | || | |||| ||| | | | ||| || |||||
Sbjct 596872 AATGCCCTCCTTGTCC-TGAATCTTGGCCTTGA-CGTTGTCGATCGTATCCGAGGATTCG 596815
Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| |||| ||||| || ||||| || || ||||| ||||| ||||||||
Sbjct 596814 ACCTCGAGTGTGATCGTCTTGCCGGTCAGGGTCTTGACAAAAATTTGCAT 596765
Score = 125 bits (138), Expect = 8e-24
Identities = 169/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| |||| | || | |||||| |||| || |||||| || || |||||||| ||
Sbjct 597676 ACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 597617
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || || |||| || |||||||| || ||||| || | |||||||||||||| ||
Sbjct 597616 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 597557
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 42158
| || |||||||||| ||| | || | |||| ||| | | | ||| || |||||
Sbjct 597556 AATGCCCTCCTTGTCC-TGAATCTTGGCCTTGA-CGTTGTCGATCGTATCCGAGGATTCG 597499
Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| |||| ||||| || ||||| || | ||||| ||||||||||||||
Sbjct 597498 ACCTCGAGTGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 597449
Score = 120 bits (132), Expect = 3e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 41980 GACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAG 42039
|||| || | | ||| | |||||| || | || |||||| || |||||||| || |
Sbjct 872299 GACCACCACGAAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGG 872240
Query 42040 CCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTG 42099
| || || || |||| || |||||||| || || || || | |||||||||||||| |
Sbjct 872239 CGAGCGTGCGACCGTCCTCGAGCTGCTTGCCCGCAAAGATCAATCGCTGCTGGTCGGGGG 872180
Query 42100 GCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 42158
| | || |||||| ||| ||| || |||| ||| | | | ||| || |||||
Sbjct 872179 GAATGCCCTCCTTATCCTGGATCTTGGCCTTGA-CGTTGTCGATCGTATCCGAGGATTCG 872121
Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| |||| ||| || || ||||| || || ||||| ||||||||||||||
Sbjct 872120 ACCTCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 872071
>seq88
Length=4649774
Score = 116 bits (128), Expect = 4e-21
Identities = 142/191 (74%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||||||||| ||||| || |||| || || | || || |||||||| || || ||
Sbjct 184800 CTCCTTTTGAATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAA 184741
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
||||| || |||||||| | || | || |||||||| ||| || ||||| |||
Sbjct 184740 GATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTTGGTTTTGA-CGT 184682
Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195
| | | ||||||| ||| || || |||| ||||| || |||||||| || ||||| |
Sbjct 184681 TGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGTGTCTTGA 184622
Query 42196 CAAAGATTTGC 42206
| |||||||||
Sbjct 184621 CGAAGATTTGC 184611
>seq73
Length=1807266
Score = 116 bits (128), Expect = 4e-21
Identities = 157/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058
|||||| || | || ||||||||| || ||||| || |||| || || | || ||
Sbjct 313142 CACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTC 313083
Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118
|||||||| || || || ||||| || |||||||| | || | | |||||||||
Sbjct 313082 GAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGGATTCCTTCCTTGTCCTG 313023
Query 42119 GATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 42177
||| || |||| ||| | | | ||| ||| ||| || || |||| |||||||| |
Sbjct 313022 GATCTTGGCCTTGA-CGTTGTCGATCGTATCGGACGACTCGACCTCGAGGGTGATGGTCT 312964
Query 42178 TGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTCA 42213
||||||| || ||||| ||||||||||||| | |||
Sbjct 312963 TGCCCGTGAGGGTCTTGACAAAGATTTGCACTGTCA 312928
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543211740735040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |