Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq88 255 6e-63 >seq88 Length=4649774 Score = 255 bits (282), Expect = 6e-63 Identities = 421/606 (69%), Gaps = 6/606 (1%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| ||||||||| || ||| || ||| | || || || |||| | Sbjct 2234276 TACAACTACTTTGGCTTCAAAACGCTCGAGCGCTCCTACTTGCTTCGCATCGACGGCAAG 2234335 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||| |||||||| || |||| |||||||||||| |||| || ||||| |||||| Sbjct 2234336 GTCGCCGAACGACCGCAGCACATGCTCATGCGCGTCGCCGTCGGCATCCACGGTCACGAC 2234395 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTA---TACCATGGCC 93894 || | || |||| | | | || |||| || | | || |||| ||| Sbjct 2234396 ATCGAGCGCGTCTTGCAGTCGTACAACCTCATGTCCGA---GCGCTACTTTACCCACGCC 2234452 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954 | ||||| || |||||||| || || || || ||| | || || ||||||||| | Sbjct 2234453 TCGCCGACGCTCTTCAACGCCGGAACGCCTCACCCGCAGCTTTCGTCCTGTTTCCTGGTC 2234512 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 |||| |||| ||| || || || || | ||||| |||||| |||||| ||| Sbjct 2234513 ACGATGAAGGACGATTCGATTGAAGGCATCTACGACACGCTCAAGACGTGTGCGCTCATT 2234572 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || || ||| || || ||||| | || | || || | || || | || |||||| Sbjct 2234573 TCCAAGACCGCCGGCGGTATCGGTTTGAGCATTCATAACATCCGCGCGACCGGCTCCTAC 2234632 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| |||||| || ||| ||| |||||| ||||||| |||||||| |||| ||||||| Sbjct 2234633 ATCGCCGGTACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAAC 2234692 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | ||||||||||| ||||| ||||| | | | || | |||||| |||| ||| Sbjct 2234693 ACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCTGGAGCCTTCGCGATCTACCTC 2234752 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 || || |||||||| ||||| | ||| | ||||| || |||||||||||||| || Sbjct 2234753 GAACCGTGGCACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAG 2234812 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 | | || | || ||||||| || |||||| | || || || |||||| | || Sbjct 2234813 GAAGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCGGATCTCTTTATGGAGCGT 2234872 Query 94315 GTCGAG 94320 |||||| Sbjct 2234873 GTCGAG 2234878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722235289760