Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq61 96.9 2e-15 >seq61 Length=3738257 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| | | | || || || || || || || || || |||||||||||| | Sbjct 597219 CCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 597160 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | |||| || | || ||||| ||| | ||||| ||||| |||||| ||| Sbjct 597159 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGA 597100 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| ||||||| || || | || || ||||| ||| || Sbjct 597099 ATGCCCTCCTTGTCCTGAATTTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACC 597040 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||||| || || || ||||| || || ||||| ||||||||| Sbjct 597039 TCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACAAAGATTTGCATA 596992 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| | | | || || || || || || || || || |||||||||||| | Sbjct 596991 CCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 596932 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | |||| || | || ||||| ||| | ||||| ||||| |||||| ||| Sbjct 596931 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGA 596872 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| ||| ||| || || | || || ||||| ||| || Sbjct 596871 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACC 596812 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | || || || || || ||||| || || |||||||||||||| Sbjct 596811 TCGAGTGTGATCGTCTTGCCGGTCAGGGTCTTGACAAAAATTTGCAT 596765 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| | | | || || || || || || || || || |||||||||||| | Sbjct 597447 CCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 597388 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | |||| || | || ||||| ||| | ||||| ||||| |||||| ||| Sbjct 597387 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGA 597328 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| ||| ||| || || | || || || || ||| || Sbjct 597327 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACC 597268 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||||| || || || ||||| || || || || ||||||||| Sbjct 597267 TCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCATA 597220 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| | | | || || || || || || || || || |||||||||||| | Sbjct 597675 CCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 597616 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | |||| || | || ||||| ||| | ||||| ||||| |||||| ||| Sbjct 597615 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGA 597556 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| ||| ||| || || | || || ||||| ||| || Sbjct 597555 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACC 597496 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | || || || || || |||| || || ||||| ||||||||| Sbjct 597495 TCGAGTGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCATA 597448 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || || || || || || || || |||||||||||| ||| | | |||| || Sbjct 597885 ACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTCA 597826 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || ||||| ||| | ||||| ||||| |||||| ||||| || |||||||| | Sbjct 597825 AGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGA 597766 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || ||| || || | || || || || ||| || || | ||||| || || Sbjct 597765 ATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACCTCGAGCGTAATCGTCTTG 597706 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || ||||| || || || || ||||||||| Sbjct 597705 CCGGTCAGGGTCTTGACGAAGATTTGCATA 597676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391320508460