Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq61 114 1e-20
seq88 91.5 1e-13
>seq61
Length=3738257
Score = 114 bits (126), Expect = 1e-20
Identities = 166/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | ||| | |||||||| || ||||| ||||| || ||||||
Sbjct 596994 ATACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCG 596935
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| || || || | || || || ||| | |||||||| |||||||| ||
Sbjct 596934 GCGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGG 596875
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|||||||| || || || ||||| || |||| || | || | || || || || ||
Sbjct 596874 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGA-CGTTGTCGATCGTATCCGAGGATTC 596816
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
||| ||||| || | ||| |||||||| || || || |||||||||||||||
Sbjct 596815 GACCTCGAGTGTGATCGTCTTGCCGGTCAGGGTCTTGACAAAAATTTGCATC 596764
>seq88
Length=4649774
Score = 91.5 bits (100), Expect = 1e-13
Identities = 143/202 (71%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || || |||||||| || || || ||| | ||| ||| || | ||
Sbjct 184811 TGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCGAGCTGC 184752
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || || | || | ||||||||||| ||||| |||||||| || ||||| || ||
Sbjct 184751 TTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTTG 184692
Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
||||| || | || | |||||||| |||||||| ||||| || | ||| ||||| ||
Sbjct 184691 GTTTTGA-CGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGT 184633
Query 45317 TAGAGTTTTTACAAAAATTTGC 45338
|| || || || || ||||||
Sbjct 184632 AAGTGTCTTGACGAAGATTTGC 184611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452002318593760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |