Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq88 163 3e-35 >seq88 Length=4649774 Score = 163 bits (180), Expect = 3e-35 Identities = 557/859 (65%), Gaps = 17/859 (2%) Strand=Plus/Minus Query 116431 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 116490 ||||| || |||| ||| || || | | |||||| | | |||||| || || || Sbjct 2235198 GCGATCGAGGCCAAATTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCAATGATCTCG 2235139 Query 116491 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 116550 || |||| || || ||| || ||||| | ||||||||| || || || |||| Sbjct 2235138 GTGCACAGGTTCGAGGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCG 2235079 Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610 || |||||||||||||| | || | || || || |||| | |||||| || | | Sbjct 2235078 GCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCGAGAATCGCGTAC 2235019 Query 116611 CATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 116669 || | | | ||| | || | || ||||| || ||||||| ||||| || | | Sbjct 2235018 CAAAGCTTTTGCG-CGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 2234960 Query 116670 GAGGGCCTCAAACTCTTCACCCACAGCCTCTGAG-AGCCCTGGTGCCTTATCTGGACAGA 116728 ||||| |||||||| || | || || | | || || || || | | || |||| Sbjct 2234959 CAGGGCGCGGAACTCTTCGCC-ATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGA 2234901 Query 116729 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 116788 |||| | ||| | || | |||| || |||| ||| ||||| || || |||||||||| Sbjct 2234900 AGAGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATAAAGAGATCCGGAATCCAGAGCG 2234841 Query 116789 CCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 116848 | |||||||||| ||| ||| |||| || | || || || || | |||| | Sbjct 2234840 CAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGA 2234781 Query 116849 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC------CTTGC 116902 | || | || || |||||||||||||| ||||| | ||||| | || |||| Sbjct 2234780 ACTCGAAGACGTCAGCGTGCCACGGTTCGAGGTAGATCGCGAAGGCTCCAGGACGCTTG- 2234722 Query 116903 GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGA 116962 ||| | |||| || || | ||| || ||| | || || ||||| || | || Sbjct 2234721 --TTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGA 2234664 Query 116963 TACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACATCGTG 117020 | || | || | ||| || || || ||| || ||| | | | || | || | || Sbjct 2234663 TGCCGTTCGAGTAGCCGTTCGTACCGGCGATGTAGGAGCC--GGTCGCGCGGATGTTATG 2234606 Query 117021 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCC 117080 ||| || ||| ||||| || || ||| || || | || ||| | |||| || | Sbjct 2234605 AATGCTCAAACCGATACCGCCGGCGGTCTTGGAAATGAGCGCACACGTCTTGAGCGTGTC 2234546 Query 117081 GTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGG 117140 |||||| || || ||||| || |||| | | || ||||| ||| ||| | || || Sbjct 2234545 GTAGATGCCTTCAATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGG 2234486 Query 117141 CCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACAT 117200 || || || ||||||||||| || || | |||||| | || | | |||||| Sbjct 2234485 GTGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACAT 2234426 Query 117201 CTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCG 117260 | ||| | || |||||| ||||| | ||||| || |||| | ||| || Sbjct 2234425 GAGGTTGTACGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACGCG 2234366 Query 117261 CATAAACATGTATTGGGGT 117279 ||| | ||||| || ||| Sbjct 2234365 CATGAGCATGTGCTGCGGT 2234347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506003660960