Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq88 163 3e-35
>seq88
Length=4649774
Score = 163 bits (180), Expect = 3e-35
Identities = 557/859 (65%), Gaps = 17/859 (2%)
Strand=Plus/Minus
Query 116431 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 116490
||||| || |||| ||| || || | | |||||| | | |||||| || || ||
Sbjct 2235198 GCGATCGAGGCCAAATTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCAATGATCTCG 2235139
Query 116491 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 116550
|| |||| || || ||| || ||||| | ||||||||| || || || ||||
Sbjct 2235138 GTGCACAGGTTCGAGGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCG 2235079
Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610
|| |||||||||||||| | || | || || || |||| | |||||| || | |
Sbjct 2235078 GCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCGAGAATCGCGTAC 2235019
Query 116611 CATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 116669
|| | | | ||| | || | || ||||| || ||||||| ||||| || | |
Sbjct 2235018 CAAAGCTTTTGCG-CGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 2234960
Query 116670 GAGGGCCTCAAACTCTTCACCCACAGCCTCTGAG-AGCCCTGGTGCCTTATCTGGACAGA 116728
||||| |||||||| || | || || | | || || || || | | || ||||
Sbjct 2234959 CAGGGCGCGGAACTCTTCGCC-ATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGA 2234901
Query 116729 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 116788
|||| | ||| | || | |||| || |||| ||| ||||| || || ||||||||||
Sbjct 2234900 AGAGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATAAAGAGATCCGGAATCCAGAGCG 2234841
Query 116789 CCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 116848
| |||||||||| ||| ||| |||| || | || || || || | |||| |
Sbjct 2234840 CAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGA 2234781
Query 116849 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC------CTTGC 116902
| || | || || |||||||||||||| ||||| | ||||| | || ||||
Sbjct 2234780 ACTCGAAGACGTCAGCGTGCCACGGTTCGAGGTAGATCGCGAAGGCTCCAGGACGCTTG- 2234722
Query 116903 GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGA 116962
||| | |||| || || | ||| || ||| | || || ||||| || | ||
Sbjct 2234721 --TTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGA 2234664
Query 116963 TACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACATCGTG 117020
| || | || | ||| || || || ||| || ||| | | | || | || | ||
Sbjct 2234663 TGCCGTTCGAGTAGCCGTTCGTACCGGCGATGTAGGAGCC--GGTCGCGCGGATGTTATG 2234606
Query 117021 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCC 117080
||| || ||| ||||| || || ||| || || | || ||| | |||| || |
Sbjct 2234605 AATGCTCAAACCGATACCGCCGGCGGTCTTGGAAATGAGCGCACACGTCTTGAGCGTGTC 2234546
Query 117081 GTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGG 117140
|||||| || || ||||| || |||| | | || ||||| ||| ||| | || ||
Sbjct 2234545 GTAGATGCCTTCAATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGG 2234486
Query 117141 CCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACAT 117200
|| || || ||||||||||| || || | |||||| | || | | ||||||
Sbjct 2234485 GTGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACAT 2234426
Query 117201 CTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCG 117260
| ||| | || |||||| ||||| | ||||| || |||| | ||| ||
Sbjct 2234425 GAGGTTGTACGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACGCG 2234366
Query 117261 CATAAACATGTATTGGGGT 117279
||| | ||||| || |||
Sbjct 2234365 CATGAGCATGTGCTGCGGT 2234347
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506003660960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |