Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq88 105 1e-17 >seq88 Length=4649774 Score = 105 bits (116), Expect = 1e-17 Identities = 132/176 (75%), Gaps = 4/176 (2%) Strand=Plus/Minus Query 203888 TAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTG 203947 ||||||||||| ||||| || || || ||| ||||| | |||||| || | |||| Sbjct 2236264 TAGTACATGCCCGTCTTCAGTCCTCGCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTGC 2236205 Query 203948 CTCA-CGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGC 204006 || ||||||| ||| | | ||||||||| || || || ||||| ||||| ||| | Sbjct 2236204 GCCATCGTTGGGCTCGACAA-GTGAATGTTTAGCGATTGCGACTGGTCAATGAA-GGCAC 2236147 Query 204007 C-CGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 | || || |||| || | |||||||||||| ||||| |||||||| || |||||| Sbjct 2236146 CTCGGTCGGCGGACAAGTCGATAATGGTCTTTTGCGAGATCTCCCAGACGGTCTTG 2236091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795153649447360