Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq73 147 5e-30
seq88 134 3e-26
seq61 116 9e-21
>seq73
Length=1807266
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | |||||| |||||||||||||||| ||||||||| ||||| || | |||||
Sbjct 313144 AGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCC 313085
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| ||||| ||||||||||| |||||||| || |||||||| |||
Sbjct 313084 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGGATTCCTTCCTTGTCC 313025
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| || || | | || || || | ||||| |||
Sbjct 313024 TGGATCTTGGCCTTGACGTTGTCGATCGTATCGGACGACTCGACCTCGAGGGTGATGGTC 312965
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| |||||||| || || ||||| |||||
Sbjct 312964 TTGCCCGTGAGGGTCTTGACAAAGATTTG 312936
>seq88
Length=4649774
Score = 134 bits (148), Expect = 3e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| | |||||| |||||||||||||| | ||||||||| ||||| || | |||||
Sbjct 184820 AGGACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCCAAGGTGCGGCCATCC 184761
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| ||||| ||||||||||| |||||||| || || ||||| ||
Sbjct 184760 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 184701
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| || ||| |||| ||||| | | || || || | |||||||||
Sbjct 184700 TGGATCTTGGTTTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 184641
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| ||||| || || || || || |||||
Sbjct 184640 TTGCCCGTAAGTGTCTTGACGAAGATTTG 184612
>seq61
Length=3738257
Score = 116 bits (128), Expect = 9e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | ||| || ||||||||||| |||| |||||| || || | || | || ||
Sbjct 596976 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCC 596917
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || |||||||| | ||||||||||| || ||| || || |||
Sbjct 596916 TCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 596857
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| ||| ||| |||| || || | | ||| || || | |||||||||
Sbjct 596856 TGAATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACCTCGAGTGTGATCGTC 596797
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || || |||||||||||
Sbjct 596796 TTGCCGGTCAGGGTCTTGACAAAAATTTG 596768
Score = 116 bits (128), Expect = 9e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | ||| || ||||||||||| |||| |||||| || || | || | || ||
Sbjct 597432 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCC 597373
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || |||||||| | ||||||||||| || ||| || || |||
Sbjct 597372 TCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 597313
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| ||| ||| |||| ||||||| | ||| || || | ||| ||||||
Sbjct 597312 TGAATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACCTCGAGCGTAATCGTC 597253
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || || || || |||||
Sbjct 597252 TTGCCGGTCAGGGTCTTGACGAAGATTTG 597224
Score = 116 bits (128), Expect = 9e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | ||| || ||||||||||| |||| |||||| || || | || | || ||
Sbjct 597888 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCC 597829
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || |||||||| | ||||||||||| || ||| || || |||
Sbjct 597828 TCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 597769
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| ||| ||| |||| ||||||| | ||| || || | ||| ||||||
Sbjct 597768 TGAATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACCTCGAGCGTAATCGTC 597709
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || || || || |||||
Sbjct 597708 TTGCCGGTCAGGGTCTTGACGAAGATTTG 597680
Score = 109 bits (120), Expect = 1e-18
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || | |||||| ||||||||||| |||| |||||||| || | ||
Sbjct 872291 CGAAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGCGAGCGTG 872232
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || || || |||||||| || || ||||| | ||||||||||| || ||| ||
Sbjct 872231 CGACCGTCCTCGAGCTGCTTGCCCGCAAAGATCAATCGCTGCTGGTCGGGGGGAATGCCC 872172
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||| ||| |||| || || | | ||| || || | |
Sbjct 872171 TCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACCTCGAGC 872112
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| |||||||| || || || || || ||||| |||||
Sbjct 872111 GTAATCGTCTTGCCGGTCAGGGTCTTGACAAAGATTTG 872074
Score = 107 bits (118), Expect = 5e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | ||| || ||||||||||| |||| |||||| || || | || | || ||
Sbjct 597204 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCC 597145
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || |||||||| | ||||||||||| || ||| || || |||
Sbjct 597144 TCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 597085
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
||||| || ||| ||| |||| || || | | ||| || || | ||| ||||||
Sbjct 597084 TGAATTTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACCTCGAGCGTAATCGTC 597025
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || || ||||| |||||
Sbjct 597024 TTGCCGGTCAGGGTCTTGACAAAGATTTG 596996
Score = 107 bits (118), Expect = 5e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | ||| || ||||||||||| |||| |||||| || || | || | || ||
Sbjct 597660 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCC 597601
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || |||||||| | ||||||||||| || ||| || || |||
Sbjct 597600 TCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 597541
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| ||| ||| |||| || || | | ||| || || | |||||||||
Sbjct 597540 TGAATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACCTCGAGTGTGATCGTC 597481
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || | || || ||||| |||||
Sbjct 597480 TTGCCGGTCAAGGTCTTGACAAAGATTTG 597452
Score = 102 bits (112), Expect = 2e-16
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | ||| || ||||||||||| |||| |||||| || || | || | || ||
Sbjct 872054 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCC 871995
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || |||||||| | ||||||||||| || || || || ||
Sbjct 871994 TCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGGATACCCTCCTTGTCT 871935
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| ||| ||| || | ||||| | | || || || | ||||||||||
Sbjct 871934 TGAATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTC 871875
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| ||||| || || || ||||| || ||
Sbjct 871874 TTGCCCGTAAGCGTCTTGACAAAGATCTG 871846
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178919243630452
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