Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq84 167 2e-36
seq61 143 3e-29
seq73 138 1e-27
seq88 122 9e-23
>seq84
Length=1022938
Score = 167 bits (184), Expect = 2e-36
Identities = 171/223 (77%), Gaps = 3/223 (1%)
Strand=Plus/Minus
Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTC 133277
|||||| || || |||||||| || |||||| | ||| || || || ||| |||||
Sbjct 125417 GATTTGGAAACCATAAAAGCATCGAGCCTCGGCGGACTGGACCTCACCAGAGAATCGCTC 125358
Query 133278 GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGAT 133337
||||| || |||||||| || |||||| ||||||||||||||| || |||||| |||
Sbjct 125357 GACCAAGTTCTCGTTGACAATCCCGTCGGAGGCGGCGAAAAAGGCGAGGACGTGCGAGAT 125298
Query 133338 GAAATGGCGCTCGTTG---TCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTC 133394
||| | |||||||| | | | | | ||||||||| || |||||||||||| |||
Sbjct 125297 GAAGTAGCGCTCGTCGGGCTTGAGCTTGTTGTCCCAGTCGTGCATGTCCTTGGACAAGTC 125238
Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTAC 133437
|| ||| ||| ||||||| || || |||||||| || ||||||
Sbjct 125237 CATCTCTTCGGCGGTCCAGAAGGATGCCTCGGCCTTCTTGTAC 125195
Score = 86.0 bits (94), Expect = 6e-12
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCT 132944
||||| | ||||||||||||| || | ||||||||| | || ||||| ||||||
Sbjct 126028 GAACAAAAGGCAAGCAAAGTCGGTGTGGAGGCCCTCGTCACGCGAGATGAGCTCGTTGGA 125969
Query 132945 GAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGG 132991
||| ||||| |||||||| | ||| || || |||||||| || ||||
Sbjct 125968 GAAGGTCAATCCGGGCATCAAGCCACGCTTCTTGAGCCAGAAGATGG 125922
>seq61
Length=3738257
Score = 143 bits (158), Expect = 3e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| || || || |||| ||||| || |
Sbjct 597677 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTCA 597736
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || | || || | ||||| ||||| |||||| |||||||
Sbjct 597737 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCA 597795
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| | || | ||||||||| ||||| || |||| ||||| ||| ||| |||||
Sbjct 597796 GCAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAA 597855
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| |||||||||| |||||||| ||| | |||| ||
Sbjct 597856 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGGGG 597903
Score = 143 bits (158), Expect = 3e-29
Identities = 164/217 (76%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || ||||| |||||||| || ||||| |||| |||||| | |
Sbjct 871843 ATGCAGATCTTTGTCAAGACGCTTACGGGCAAGACGATCACGCTCGAGGTCGAGTCGTCG 871902
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | || |||| | |||| || || | ||||| ||||| || ||| ||||||
Sbjct 871903 GACACGATTGACAACG--TCAAGACCAAGATTCAAGACAAGGAGGGTATCCCCCCCGACC 871960
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| | || | ||||||||| ||||| || |||| ||||| ||| ||| ||||
Sbjct 871961 AGCAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACA 872020
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||||| ||||| |||||||||| |||||||| ||
Sbjct 872021 ACATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCG 872057
Score = 140 bits (154), Expect = 3e-28
Identities = 162/216 (75%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| || || || |||| ||||| || |
Sbjct 597221 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTCA 597280
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || | || || | ||||| ||||| |||||| |||||||
Sbjct 597281 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCA 597339
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| | || | ||||||||| ||||| || |||| ||||| ||| ||| |||||
Sbjct 597340 GCAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAA 597399
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||| ||||| |||||||||| |||||||| ||
Sbjct 597400 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCG 597435
Score = 134 bits (148), Expect = 1e-26
Identities = 161/216 (75%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || || || || || ||||| || ||||| |||| ||||| || |
Sbjct 596765 ATGCAAATTTTTGTCAAGACCCTGACCGGCAAGACGATCACACTCGAGGTCGAATCCTCG 596824
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | |||| | || | || || | ||||| ||||| |||||| |||||||
Sbjct 596825 GATACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCA 596883
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| | || | ||||||||| ||||| || |||| ||||| ||| ||| |||||
Sbjct 596884 GCAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAA 596943
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||| ||||| |||||||||| |||||||| ||
Sbjct 596944 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCG 596979
Score = 134 bits (148), Expect = 1e-26
Identities = 161/216 (75%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || || || || || ||||| || || || |||| ||||| || |
Sbjct 596993 ATGCAAATCTTTGTCAAGACCCTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTCG 597052
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | |||| | || | ||||| | ||||| ||||| |||||| |||||||
Sbjct 597053 GATACGATCGACAACG-TCAAGGCCAAAATTCAGGACAAGGAGGGCATTCCCCCCGACCA 597111
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| | || | ||||||||| ||||| || |||| ||||| ||| ||| |||||
Sbjct 597112 GCAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAA 597171
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||| ||||| |||||||||| |||||||| ||
Sbjct 597172 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCG 597207
Score = 131 bits (144), Expect = 2e-25
Identities = 160/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || || || | || ||||| || ||||| |||| ||||| || |
Sbjct 597449 ATGCAAATCTTTGTCAAGACCTTGACCGGCAAGACGATCACACTCGAGGTCGAATCCTCG 597508
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | |||| | || | || || | ||||| ||||| |||||| |||||||
Sbjct 597509 GATACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCA 597567
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| | || | ||||||||| ||||| || |||| ||||| ||| ||| |||||
Sbjct 597568 GCAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAA 597627
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||| ||||| |||||||||| |||||||| ||
Sbjct 597628 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCG 597663
>seq73
Length=1807266
Score = 138 bits (152), Expect = 1e-27
Identities = 161/215 (75%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 38245 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCG 38304
||||||| || || || || ||||||||||| ||||||||| |||| |||||| | |||
Sbjct 312934 TGCAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 312993
Query 38305 ACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
| | | | |||| | || | || |||| ||||| || ||||| ||| | |||||
Sbjct 312994 ATACGATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCCCCAGACCAG 313052
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || ||||| | || ||||| ||||| || || | |||||| | ||||||||||
Sbjct 313053 CAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAAC 313112
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||||||||| |||| || || |||||||| ||
Sbjct 313113 ATCCAAAAGGAGTCGACCCTCCACTTGGTGCTCCG 313147
Score = 127 bits (140), Expect = 2e-24
Identities = 166/227 (73%), Gaps = 7/227 (3%)
Strand=Plus/Minus
Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTC--TTGAGCGAAACGC 133275
||| |||||||| |||||||||| ||| ||| | | |||||| || ||||| || | |
Sbjct 1385941 GATCTGAAAGCCATAAAAGCACCTCGCTTCGGCGAACTGCACCTCACTTGAG--AACCTC 1385884
Query 133276 TCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTG 133335
||||||||||| ||||| |||| || || |||||||| ||||| ||||||||
Sbjct 1385883 TCGACCAGATTCTCGTTCACGACCCCATCCGAAGCGGCGAAGAAGGCGAGCACGTGGGCA 1385824
Query 133336 ATGAAATGGCGCTCGTTGTCGTT---CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGG 133392
|| || | ||| |||| || ||| | | | | ||||||| | ||| ||| ||
Sbjct 1385823 ATAAAGTAGCGTTCGTCGTTGTTGAGCTTGTGGTGCCAGTCGTGGAGGTCGTTGCCGAGA 1385764
Query 133393 TCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
|| | ||| ||| ||| |||||||||||| | |||| |||||||||
Sbjct 1385763 TCGATCTCTTCGGCGGACCAAAACGACGCTTGAGCTTGTTTGTACAT 1385717
Score = 91.5 bits (100), Expect = 1e-13
Identities = 94/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 132876 CAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAG 132935
|||||| |||||| | | || || ||| ||| | || ||||| | |||||||||
Sbjct 1386537 CAAATGGCTGAACAAGAGGACGGCGAATTCGGTATGAAGACCTTCGTCGCGGGAAATGAG 1386478
Query 132936 TTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGC 132995
|||||| ||||| | ||| |||||||| || ||||||||||||||||| |||| |||
Sbjct 1386477 CTCGTTGGAGAAAGAGAGGCCAGGCATGAGCCCTCGTTTTTTGAGCCAAAAGATGGAGGC 1386418
Query 132996 GAA 132998
|||
Sbjct 1386417 GAA 1386415
>seq88
Length=4649774
Score = 122 bits (134), Expect = 9e-23
Identities = 167/228 (73%), Gaps = 4/228 (2%)
Strand=Plus/Plus
Query 38246 GCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGA 38305
|||||| ||||| || || || |||||||| || |||||| |||| |||||| | ||||
Sbjct 184611 GCAAATCTTCGTCAAGACACTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 184670
Query 38306 CAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCAA 38363
|| | | |||| | ||| || |||| ||||| || || || |||||| |||||
Sbjct 184671 CACGATCGACAACG-TCAAAACCAAGATCCAAGACAAGGAAGGCAT-CCCGCCAGACCAG 184728
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || ||||| | || ||||| ||||| || || | |||||| | ||||||||||
Sbjct 184729 CAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAAC 184788
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|| |||||||| |||| || || ||||| || || | |||| |||
Sbjct 184789 ATTCAAAAGGAGTCGACCCTCCACTTGGTCCTCCGCCTCCGAGGTGGC 184836
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500171824663040
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