Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq62 342 7e-89 seq83 159 4e-34 seq65 158 2e-33 seq102 105 8e-18 seq73 89.7 7e-13 >seq62 Length=1869174 Score = 342 bits (378), Expect = 7e-89 Identities = 570/824 (69%), Gaps = 0/824 (0%) Strand=Plus/Plus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| || | ||| ||||| ||||| | || ||||| || || |||||||||||||| Sbjct 500042 TCACCGGTGAGGATAGCGGCCTGGACAGCAGCACCGTAGGCAACGGCCTCATCGGGGTTG 500101 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || |||| || ||||| || || ||||| | | || || | || ||| Sbjct 500102 ATGGACTTGTTAGGTTCCTTGCCGTTGAAGTAGTCCGAGACGAGTTTCTGGACCTTGGGG 500161 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || ||||| || | ||||| || | || | || |||||||| || Sbjct 500162 ATACGAGTGGACCCACCAACGAGGACGATCTCGTGGACGGAAGCCTTGTCGATCTTGGAA 500221 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || || ||||| || ||||| |||||||||||| |||| ||| Sbjct 500222 TCGCGGAGAACCTTCTCGACGGGGTCCATGGTGCCACGGAACAAGTCTTGGCACAACTCC 500281 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || || || |||||||| ||||| || ||||| || | || ||| | | ||| || || Sbjct 500282 TCGAAGCGGGCACGGGTGATGGAGGTGTAGAAGTCGATACCCTCGAAGAGCGAGTCGATC 500341 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || ||||| || || || | |||||| | || ||||| || ||||| || || || || Sbjct 500342 TCGATGGTGGTCTGGGCGGCCGAAGAAAGGGTGCGCTTGGCACGCTCGCAGGCAGTGCGG 500401 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | |||||| || ||||| | ||| || | ||| ||||| | || || || ||||| Sbjct 500402 AGACGACGGAGAGCACGGGCGTTCGACGAGAGATCCTTCTTGTTCTTGCGCTTGAACTCG 500461 Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489 | |||||| | |||| |||||||| ||||| |||||||| || || || Sbjct 500462 GCGACGAAGTGGGTGACAAGTCGGTTGTCGAAATCCTCACCTCCCAAGTGGGTGTCACCG 500521 Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549 ||||| || ||||| || |||||||| | || ||| | || | || ||||| ||||| Sbjct 500522 GCGGTGGCCTTGACCTCGAAGATACCCTCCTCGATGGTCAAAAGGGACACATCGAACGTT 500581 Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609 || || || || || || ||||| |||||| | ||| || | | || || ||||| ||| Sbjct 500582 CCTCCTCCGAGATCGAAGATGAGGACGTTCTTCTCGCCGACCGTCTTTTTGTCGAGGCCG 500641 Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669 || ||||| || || || || || || ||||| ||||| || ||| || || | || Sbjct 500642 TAAGCGATGGCGGCGGCGGTAGGCTCGTTAATGATACGGAGGACGTTGAGACCCGAGATG 500701 Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729 | ||||| || || |||||||| ||||| || || |||||||| ||||| || ||| Sbjct 500702 ACACCGGCATCCTTGGTGGCTTGTCGCTGCGAGTCATTGAAGTAGGCGGGGACGGTGACG 500761 Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789 || |||| | || || | ||||| || | || ||| | || ||||| ||| || Sbjct 500762 ACGGCGTTGGAAACGGTCGTGCCGAGGTAGGCCTCAGCGGTCTCCTTCATCTTGAGCAGG 500821 Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACC 7833 | ||| || || || || || | | ||||| || || || || Sbjct 500822 ATCATGGAAGAGATTTCCTCGGGGGTGAACTGCTTGGTCTCGCC 500865 >seq83 Length=2022715 Score = 159 bits (176), Expect = 4e-34 Identities = 232/327 (71%), Gaps = 3/327 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||||||||| || || || ||||| || ||| ||||||| ||| Sbjct 99753 TCAAAGTCCTCACCACCCAAGTGGGTGTCACCTGCGGTGGCCAAGACCTCAAAGACACCG 99694 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | | ||| ||||| ||||| || || || || ||| ||| || | | Sbjct 99693 TCCTCGATCGAGAGGAGCGAGACATCGAACGTTCCTCCTCCAAGATCATAAACGATGATG 99634 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | | | |||| ||||| ||||| ||||| || || || || || ||| Sbjct 99633 TTGCGCTCGCCACC---GGTCTTGTCGAGGCCGTAGGCGATTGCGGCGGCGGTGGGCTCA 99577 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | | ||||||| ||| || || || || || | || || || |||||||||||| Sbjct 99576 TTGACGACACGAAGAACGTTGAGACCGGCGATCGTGCCGGCGTCCTTGGTCGCTTGTCGT 99517 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || | ||||| |||||||||||||| || ||||| |||| ||||| ||||| || | Sbjct 99516 TGAGCGTCGTTGAAGTAGGCCGGGACGGTGACGACGGCGTGAGTGACCTTCTTGCCCAAG 99457 Query 7757 TACGATTCCGCGATATCTTTCATTTTG 7783 || | || ||| | || ||||| ||| Sbjct 99456 TAGGTCTCGGCGGTCTCCTTCATCTTG 99430 Score = 113 bits (124), Expect = 6e-20 Identities = 224/328 (68%), Gaps = 8/328 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||| | || || | ||| ||||| ||||| || |||| ||| Sbjct 1708462 TCAAAGTCCTCACCACCGAGATGGGTGTTCCCGTTGGTCGACTTGACCTCGAAGACACCC 1708521 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || || | | | ||| ||||| ||||| || || || || || | | | || Sbjct 1708522 TTTTGCATCTCGAGGATCGAGACATCGAACGTTCCTCCTCCAAGATCGTAGACGG---CG 1708578 Query 7577 TTCGTATCGTC-GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || | |||| ||| ||| | ||||||||||||||| || || || || || || Sbjct 1708579 ATC-TGTCGTGAGTCGTTGCGGT---CGAGACCGTACGCGAGGGCAGCGGCGGTGGGCTC 1708634 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || | ||| || || || |||||||| || | || || || ||||| ||||| Sbjct 1708635 GTTGATGACACGGAGCACGTCAAGACCAGCAATCGTACCGGCGTCCTTGGTCGCCTGTCG 1708694 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||||| ||||| |||||||| ||||| || ||||| |||| | |||| ||| ||||| Sbjct 1708695 CTGCGAGTCGTTGAAGTAGGCGGGGACAGTGACGACGGCGTGCTTGACCGGCTTTCCGAG 1708754 Query 7756 ATACGATTCCGCGATATCTTTCATTTTG 7783 || || ||| | || ||||| ||| Sbjct 1708755 GTAGCCCTCGGCGGTCTCCTTCATCTTG 1708782 >seq65 Length=2871421 Score = 158 bits (174), Expect = 2e-33 Identities = 324/478 (68%), Gaps = 13/478 (3%) Strand=Plus/Plus Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| || ||||| ||||| | ||| | |||||| || |||||||||| |||| Sbjct 1901613 GTGCGCTTGGCACGCTCGCACGCGGATCGGAGACGACGGAGAGCACGCGGGTCCTCGGAG 1901672 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGAAGGAGTC-TCGAAT 7457 || || ||| | || | | ||||| | |||||| || ||| | | | | | Sbjct 1901673 ATGTCGAGCTTGTTCTTCCTCTCGAACTCCTTCTTGAAGTGCTCCAAGAGGGCGTTG--T 1901730 Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517 | || || || ||||||||||| ||||| || ||||| || ||||| | |||| ||| | Sbjct 1901731 CAAAGTCCTCGCCACCCAAGTGGGTATCACCGGCGGTGGCCTTGACGGCGAAGACACCAC 1901790 Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577 | ||| | || | ||| ||||| || || || || || || ||||| ||||| ||| Sbjct 1901791 CCGAGATGGTCAAGAGCGAGACATCGAAAGTTCCTCCTCCAAGATCAAAGATGAGAACGA 1901850 Query 7578 TCGTATC-------GTCGTCT--TTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCG 7628 | | || | | ||| || || | |||| ||||| ||||| || || || | Sbjct 1901851 GCTTCTCCTTCTTGGACTTCTCGGTGGCCTCACCGAGGCCGTAGGCGATGGCAGCGGCGG 1901910 Query 7629 TTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCG 7688 | || || || || ||||| || || || ||||| || ||| | || || || |||| Sbjct 1901911 TGGGCTCGTTGATGATACGGAGCACGTCCAAACCAGCGATCGTTCCGGCGTCCTTGGTCG 1901970 Query 7689 CTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCT 7748 | || ||||| ||||| ||||| || ||||| || ||||| || | | |||| | | Sbjct 1901971 AGAGACGCTGCGAGTCGTTGAAGTAAGCGGGGACAGTAACGACGGCCTTCTTGACCTCTT 1902030 Query 7749 TACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTC 7806 | ||||| | | || ||| | || || | |||| || ||||| || || ||||| Sbjct 1902031 TGCCGAGTTTGGTCTCAGCGGTCTCCTTGAGCTTGGAGAGGACCATGGACGAGATCTC 1902088 Score = 104 bits (114), Expect = 3e-17 Identities = 115/153 (75%), Gaps = 3/153 (2%) Strand=Plus/Plus Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052 ||| |||| ||| || || ||||| || | | | || || ||||| || || ||||| Sbjct 1902348 CTTGGCCGAGTCACCAATGAGACGCTCGGTCT---CGGTGAAGGCGACATAAGAAGGGGT 1902404 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112 || || || || |||||||| || || || || || ||||||||||||||||| ||||| Sbjct 1902405 GGTGCGGTTGCCCTGGTCGTTGGCGATGATCTCGACTCGGTCGTTTTGCCAGACACCGAC 1902464 Query 8113 GCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 ||| || || || ||||| | ||| ||||| || Sbjct 1902465 GCAGGAGTAGGTGGTTCCAAGATCGATACCTAT 1902497 >seq102 Length=717467 Score = 105 bits (116), Expect = 8e-18 Identities = 257/387 (66%), Gaps = 2/387 (1%) Strand=Plus/Plus Query 22444 TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGAA 22503 || || || || || || || ||| | ||||| || || || || || ||| || Sbjct 83568 TTCTACCAAGCCTCGACCTCCGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAATCCGAG 83627 Query 22504 AATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGGG-C 22562 | || || || ||||| ||||| || || || || || || ||| | | ||| | Sbjct 83628 ACGACGCCCTTCTACCCTCGTTCGCCTTACGGCGTTGCCAAGTTGTACGCCTTCTGGATC 83687 Query 22563 GACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCA 22622 | || || || | || || |||| |||| || ||||| ||||| |||||||||| Sbjct 83688 GTCAAG-AACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCTTGTTCAACCA 83746 Query 22623 CGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAA 22682 ||| || ||| | || ||| | |||||| || | ||||| | | | |||||| | Sbjct 83747 CGAGTCCCCGCGTCGTGGTCGCACCTTCGTCACGAGGAAAATCTCGCGAGCTGTCGCCGA 83806 Query 22683 TATCAGTGCAGGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGATTG 22742 ||| ||| |||| | || | ||||| || ||| | || || || || || || Sbjct 83807 GATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAACTTGGAGGCCAAGCGTGACTG 83866 Query 22743 GGGTCATGCACGCGATTACGTGAAATGTATGTGGAAAATATTACAACAAGATAAACCGGA 22802 ||| || |||||||| |||||| | ||||||||| || | || ||||| | || || Sbjct 83867 GGGACACGCACGCGACTACGTGGAGGGTATGTGGATGATGCTGCAGCAAGACACCCCCGA 83926 Query 22803 AGATTTTGTTATTGCAACAGGCGTAAC 22829 || ||||| | || || |||| ||| Sbjct 83927 CGACTTTGTCCTCGCGACGGGCGAAAC 83953 >seq73 Length=1807266 Score = 89.7 bits (98), Expect = 7e-13 Identities = 232/352 (66%), Gaps = 4/352 (1%) Strand=Plus/Plus Query 184031 TAATGAATCATGTTAAGAATAAGTCCCTTGATATGACTTCCATCGTTATCTGCATCGGTC 184090 |||| || | ||| | || || |||||||| || |||||||| |||| ||||| | Sbjct 1175182 TAATCAAGGAAGTTGATGATCAGACCCTTGATGTGCGATCCATCGTGATCTTGATCGGCC 1175241 Query 184091 ATGATCATGAGTCTTCCGTATCTGAGTTCGGAGAGTGATGTATACACTTTCCCTTGCTGA 184150 ||||||||||| | ||||| | ||| | || || || ||||| || ||||| Sbjct 1175242 ATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTCGGTGTAAACTTTGCCCTGCTGC 1175301 Query 184151 AGCCCCAAAATCTTTTTAAGATCATTAAACTCCTTGTTTTCGGTAAGTTGTTTTACACTC 184210 || ||||| |||| || | | | || ||| || ||| ||| ||| | | Sbjct 1175302 AGACCCAAGATCTGCTTGATCGCTTGAATCTCGGCATTGTCGAGAAGGGCTTTGCCCGCC 1175361 Query 184211 GCGTCACGCACGTTCTTACATTTACCCCTAAGCGGAAAAACACCGTAATGATCACGACCA 184270 || ||||| ||||| | || || | | || || ||||| || | || ||||| Sbjct 1175362 GCTTCACGTACGTTGAGCAACTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCG 1175421 Query 184271 ACAACTGAAAGACCAGCAATTGCAAGTGTTTTTGCAGAATCACCTTCGGTAATAATAAGA 184330 || || | ||||| | | ||||| | || || ||||| |||||||| | || || Sbjct 1175422 ACGACAGCCAGACCCGAGACGGCAAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGC 1175481 Query 184331 GTACACTT--ACCAGAGTGTGTGGTACCGGCTTTATTGGCATCGTCGAGTTT 184380 || ||||| ||| || | ||||| || ||||| ||||| ||||| || Sbjct 1175482 GTGCACTTGGACC--CGTTCCTCGTACCAGCGTTATTCGCATCTTCGAGCTT 1175531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131561491040