Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq62 342 7e-89
seq83 159 4e-34
seq65 158 2e-33
seq102 105 8e-18
seq73 89.7 7e-13
>seq62
Length=1869174
Score = 342 bits (378), Expect = 7e-89
Identities = 570/824 (69%), Gaps = 0/824 (0%)
Strand=Plus/Plus
Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069
||||| || | ||| ||||| ||||| | || ||||| || || ||||||||||||||
Sbjct 500042 TCACCGGTGAGGATAGCGGCCTGGACAGCAGCACCGTAGGCAACGGCCTCATCGGGGTTG 500101
Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129
|| | || || |||| || ||||| || || ||||| | | || || | || |||
Sbjct 500102 ATGGACTTGTTAGGTTCCTTGCCGTTGAAGTAGTCCGAGACGAGTTTCTGGACCTTGGGG 500161
Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189
|| || || || ||||| || | ||||| || | || | || |||||||| ||
Sbjct 500162 ATACGAGTGGACCCACCAACGAGGACGATCTCGTGGACGGAAGCCTTGTCGATCTTGGAA 500221
Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249
|| || || || ||||| || ||||| |||||||||||| |||| |||
Sbjct 500222 TCGCGGAGAACCTTCTCGACGGGGTCCATGGTGCCACGGAACAAGTCTTGGCACAACTCC 500281
Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309
|| || || |||||||| ||||| || ||||| || | || ||| | | ||| || ||
Sbjct 500282 TCGAAGCGGGCACGGGTGATGGAGGTGTAGAAGTCGATACCCTCGAAGAGCGAGTCGATC 500341
Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369
|| ||||| || || || | |||||| | || ||||| || ||||| || || || ||
Sbjct 500342 TCGATGGTGGTCTGGGCGGCCGAAGAAAGGGTGCGCTTGGCACGCTCGCAGGCAGTGCGG 500401
Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429
| |||||| || ||||| | ||| || | ||| ||||| | || || || |||||
Sbjct 500402 AGACGACGGAGAGCACGGGCGTTCGACGAGAGATCCTTCTTGTTCTTGCGCTTGAACTCG 500461
Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489
| |||||| | |||| |||||||| ||||| |||||||| || || ||
Sbjct 500462 GCGACGAAGTGGGTGACAAGTCGGTTGTCGAAATCCTCACCTCCCAAGTGGGTGTCACCG 500521
Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549
||||| || ||||| || |||||||| | || ||| | || | || ||||| |||||
Sbjct 500522 GCGGTGGCCTTGACCTCGAAGATACCCTCCTCGATGGTCAAAAGGGACACATCGAACGTT 500581
Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609
|| || || || || || ||||| |||||| | ||| || | | || || ||||| |||
Sbjct 500582 CCTCCTCCGAGATCGAAGATGAGGACGTTCTTCTCGCCGACCGTCTTTTTGTCGAGGCCG 500641
Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669
|| ||||| || || || || || || ||||| ||||| || ||| || || | ||
Sbjct 500642 TAAGCGATGGCGGCGGCGGTAGGCTCGTTAATGATACGGAGGACGTTGAGACCCGAGATG 500701
Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729
| ||||| || || |||||||| ||||| || || |||||||| ||||| || |||
Sbjct 500702 ACACCGGCATCCTTGGTGGCTTGTCGCTGCGAGTCATTGAAGTAGGCGGGGACGGTGACG 500761
Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789
|| |||| | || || | ||||| || | || ||| | || ||||| ||| ||
Sbjct 500762 ACGGCGTTGGAAACGGTCGTGCCGAGGTAGGCCTCAGCGGTCTCCTTCATCTTGAGCAGG 500821
Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACC 7833
| ||| || || || || || | | ||||| || || || ||
Sbjct 500822 ATCATGGAAGAGATTTCCTCGGGGGTGAACTGCTTGGTCTCGCC 500865
>seq83
Length=2022715
Score = 159 bits (176), Expect = 4e-34
Identities = 232/327 (71%), Gaps = 3/327 (1%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| || || |||||||||||||| || || || ||||| || ||| ||||||| |||
Sbjct 99753 TCAAAGTCCTCACCACCCAAGTGGGTGTCACCTGCGGTGGCCAAGACCTCAAAGACACCG 99694
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| || || | | ||| ||||| ||||| || || || || ||| ||| || | |
Sbjct 99693 TCCTCGATCGAGAGGAGCGAGACATCGAACGTTCCTCCTCCAAGATCATAAACGATGATG 99634
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| | | | |||| ||||| ||||| ||||| || || || || || |||
Sbjct 99633 TTGCGCTCGCCACC---GGTCTTGTCGAGGCCGTAGGCGATTGCGGCGGCGGTGGGCTCA 99577
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| | | ||||||| ||| || || || || || | || || || ||||||||||||
Sbjct 99576 TTGACGACACGAAGAACGTTGAGACCGGCGATCGTGCCGGCGTCCTTGGTCGCTTGTCGT 99517
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| | ||||| |||||||||||||| || ||||| |||| ||||| ||||| || |
Sbjct 99516 TGAGCGTCGTTGAAGTAGGCCGGGACGGTGACGACGGCGTGAGTGACCTTCTTGCCCAAG 99457
Query 7757 TACGATTCCGCGATATCTTTCATTTTG 7783
|| | || ||| | || ||||| |||
Sbjct 99456 TAGGTCTCGGCGGTCTCCTTCATCTTG 99430
Score = 113 bits (124), Expect = 6e-20
Identities = 224/328 (68%), Gaps = 8/328 (2%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| || || |||||||| | || || | ||| ||||| ||||| || |||| |||
Sbjct 1708462 TCAAAGTCCTCACCACCGAGATGGGTGTTCCCGTTGGTCGACTTGACCTCGAAGACACCC 1708521
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
|| || | | | ||| ||||| ||||| || || || || || | | | ||
Sbjct 1708522 TTTTGCATCTCGAGGATCGAGACATCGAACGTTCCTCCTCCAAGATCGTAGACGG---CG 1708578
Query 7577 TTCGTATCGTC-GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635
|| | |||| ||| ||| | ||||||||||||||| || || || || || ||
Sbjct 1708579 ATC-TGTCGTGAGTCGTTGCGGT---CGAGACCGTACGCGAGGGCAGCGGCGGTGGGCTC 1708634
Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695
|| || | ||| || || || |||||||| || | || || || ||||| |||||
Sbjct 1708635 GTTGATGACACGGAGCACGTCAAGACCAGCAATCGTACCGGCGTCCTTGGTCGCCTGTCG 1708694
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
||||| ||||| |||||||| ||||| || ||||| |||| | |||| ||| |||||
Sbjct 1708695 CTGCGAGTCGTTGAAGTAGGCGGGGACAGTGACGACGGCGTGCTTGACCGGCTTTCCGAG 1708754
Query 7756 ATACGATTCCGCGATATCTTTCATTTTG 7783
|| || ||| | || ||||| |||
Sbjct 1708755 GTAGCCCTCGGCGGTCTCCTTCATCTTG 1708782
>seq65
Length=2871421
Score = 158 bits (174), Expect = 2e-33
Identities = 324/478 (68%), Gaps = 13/478 (3%)
Strand=Plus/Plus
Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399
|| ||||| || ||||| ||||| | ||| | |||||| || |||||||||| ||||
Sbjct 1901613 GTGCGCTTGGCACGCTCGCACGCGGATCGGAGACGACGGAGAGCACGCGGGTCCTCGGAG 1901672
Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGAAGGAGTC-TCGAAT 7457
|| || ||| | || | | ||||| | |||||| || ||| | | | | |
Sbjct 1901673 ATGTCGAGCTTGTTCTTCCTCTCGAACTCCTTCTTGAAGTGCTCCAAGAGGGCGTTG--T 1901730
Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517
| || || || ||||||||||| ||||| || ||||| || ||||| | |||| ||| |
Sbjct 1901731 CAAAGTCCTCGCCACCCAAGTGGGTATCACCGGCGGTGGCCTTGACGGCGAAGACACCAC 1901790
Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577
| ||| | || | ||| ||||| || || || || || || ||||| ||||| |||
Sbjct 1901791 CCGAGATGGTCAAGAGCGAGACATCGAAAGTTCCTCCTCCAAGATCAAAGATGAGAACGA 1901850
Query 7578 TCGTATC-------GTCGTCT--TTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCG 7628
| | || | | ||| || || | |||| ||||| ||||| || || || |
Sbjct 1901851 GCTTCTCCTTCTTGGACTTCTCGGTGGCCTCACCGAGGCCGTAGGCGATGGCAGCGGCGG 1901910
Query 7629 TTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCG 7688
| || || || || ||||| || || || ||||| || ||| | || || || ||||
Sbjct 1901911 TGGGCTCGTTGATGATACGGAGCACGTCCAAACCAGCGATCGTTCCGGCGTCCTTGGTCG 1901970
Query 7689 CTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCT 7748
| || ||||| ||||| ||||| || ||||| || ||||| || | | |||| | |
Sbjct 1901971 AGAGACGCTGCGAGTCGTTGAAGTAAGCGGGGACAGTAACGACGGCCTTCTTGACCTCTT 1902030
Query 7749 TACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTC 7806
| ||||| | | || ||| | || || | |||| || ||||| || || |||||
Sbjct 1902031 TGCCGAGTTTGGTCTCAGCGGTCTCCTTGAGCTTGGAGAGGACCATGGACGAGATCTC 1902088
Score = 104 bits (114), Expect = 3e-17
Identities = 115/153 (75%), Gaps = 3/153 (2%)
Strand=Plus/Plus
Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052
||| |||| ||| || || ||||| || | | | || || ||||| || || |||||
Sbjct 1902348 CTTGGCCGAGTCACCAATGAGACGCTCGGTCT---CGGTGAAGGCGACATAAGAAGGGGT 1902404
Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112
|| || || || |||||||| || || || || || ||||||||||||||||| |||||
Sbjct 1902405 GGTGCGGTTGCCCTGGTCGTTGGCGATGATCTCGACTCGGTCGTTTTGCCAGACACCGAC 1902464
Query 8113 GCACGAATACGTTGTTCCTAAATCAATACCGAT 8145
||| || || || ||||| | ||| ||||| ||
Sbjct 1902465 GCAGGAGTAGGTGGTTCCAAGATCGATACCTAT 1902497
>seq102
Length=717467
Score = 105 bits (116), Expect = 8e-18
Identities = 257/387 (66%), Gaps = 2/387 (1%)
Strand=Plus/Plus
Query 22444 TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGAA 22503
|| || || || || || || ||| | ||||| || || || || || ||| ||
Sbjct 83568 TTCTACCAAGCCTCGACCTCCGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAATCCGAG 83627
Query 22504 AATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGGG-C 22562
| || || || ||||| ||||| || || || || || || ||| | | ||| |
Sbjct 83628 ACGACGCCCTTCTACCCTCGTTCGCCTTACGGCGTTGCCAAGTTGTACGCCTTCTGGATC 83687
Query 22563 GACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCA 22622
| || || || | || || |||| |||| || ||||| ||||| ||||||||||
Sbjct 83688 GTCAAG-AACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCTTGTTCAACCA 83746
Query 22623 CGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAA 22682
||| || ||| | || ||| | |||||| || | ||||| | | | |||||| |
Sbjct 83747 CGAGTCCCCGCGTCGTGGTCGCACCTTCGTCACGAGGAAAATCTCGCGAGCTGTCGCCGA 83806
Query 22683 TATCAGTGCAGGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGATTG 22742
||| ||| |||| | || | ||||| || ||| | || || || || || ||
Sbjct 83807 GATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAACTTGGAGGCCAAGCGTGACTG 83866
Query 22743 GGGTCATGCACGCGATTACGTGAAATGTATGTGGAAAATATTACAACAAGATAAACCGGA 22802
||| || |||||||| |||||| | ||||||||| || | || ||||| | || ||
Sbjct 83867 GGGACACGCACGCGACTACGTGGAGGGTATGTGGATGATGCTGCAGCAAGACACCCCCGA 83926
Query 22803 AGATTTTGTTATTGCAACAGGCGTAAC 22829
|| ||||| | || || |||| |||
Sbjct 83927 CGACTTTGTCCTCGCGACGGGCGAAAC 83953
>seq73
Length=1807266
Score = 89.7 bits (98), Expect = 7e-13
Identities = 232/352 (66%), Gaps = 4/352 (1%)
Strand=Plus/Plus
Query 184031 TAATGAATCATGTTAAGAATAAGTCCCTTGATATGACTTCCATCGTTATCTGCATCGGTC 184090
|||| || | ||| | || || |||||||| || |||||||| |||| ||||| |
Sbjct 1175182 TAATCAAGGAAGTTGATGATCAGACCCTTGATGTGCGATCCATCGTGATCTTGATCGGCC 1175241
Query 184091 ATGATCATGAGTCTTCCGTATCTGAGTTCGGAGAGTGATGTATACACTTTCCCTTGCTGA 184150
||||||||||| | ||||| | ||| | || || || ||||| || |||||
Sbjct 1175242 ATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTCGGTGTAAACTTTGCCCTGCTGC 1175301
Query 184151 AGCCCCAAAATCTTTTTAAGATCATTAAACTCCTTGTTTTCGGTAAGTTGTTTTACACTC 184210
|| ||||| |||| || | | | || ||| || ||| ||| ||| | |
Sbjct 1175302 AGACCCAAGATCTGCTTGATCGCTTGAATCTCGGCATTGTCGAGAAGGGCTTTGCCCGCC 1175361
Query 184211 GCGTCACGCACGTTCTTACATTTACCCCTAAGCGGAAAAACACCGTAATGATCACGACCA 184270
|| ||||| ||||| | || || | | || || ||||| || | || |||||
Sbjct 1175362 GCTTCACGTACGTTGAGCAACTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCG 1175421
Query 184271 ACAACTGAAAGACCAGCAATTGCAAGTGTTTTTGCAGAATCACCTTCGGTAATAATAAGA 184330
|| || | ||||| | | ||||| | || || ||||| |||||||| | || ||
Sbjct 1175422 ACGACAGCCAGACCCGAGACGGCAAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGC 1175481
Query 184331 GTACACTT--ACCAGAGTGTGTGGTACCGGCTTTATTGGCATCGTCGAGTTT 184380
|| ||||| ||| || | ||||| || ||||| ||||| ||||| ||
Sbjct 1175482 GTGCACTTGGACC--CGTTCCTCGTACCAGCGTTATTCGCATCTTCGAGCTT 1175531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635131561491040
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