Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq88 149 8e-31
seq73 131 2e-25
seq102 107 2e-18
seq84 98.7 1e-15
>seq88
Length=4649774
Score = 149 bits (164), Expect = 8e-31
Identities = 524/807 (65%), Gaps = 21/807 (3%)
Strand=Plus/Plus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|| ||| ||||| ||||||| ||||| |||| ||||| || | || || || ||
Sbjct 2234348 CCGCAGCACATGCTCATGCGCGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTC 2234407
Query 111672 TTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730
||| || | ||| || |||||| | | || || | |||||| | || || |||||
Sbjct 2234408 TTGCAGTCGTACAACCTCATGTCCGAGCGCTACTTT-ACCCACGCCTCGCCGACGCTCTT 2234466
Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790
|||||| || || || || || | || |||||||| | | | ||||| ||
Sbjct 2234467 CAACGCCGGAACGCCTCACCCGCAGCTTTCGTCCTGTTTCCTGGTCACGATGAAGGACGA 2234526
Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850
||| || | ||||| |||| ||| |||| ||||| | || || ||| || ||
Sbjct 2234527 TTCGATTGAAGGCATCTACGACACGCTCAAGACGTGTGCGCTCATTTCCAAGACCGCCGG 2234586
Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGTACA 111908
|||||||| || ||| ||| | || | || | | | ||| || | | |||||
Sbjct 2234587 CGGTATCGGTTTGAGCATTCATAACATCCGCGCGACC--GGCTCCTACATCGCCGGTACG 2234644
Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968
|| || | || | || || | || ||||| || || | ||| ||| ||||||||
Sbjct 2234645 AACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTAC 2234704
Query 111969 GTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022
|| |||||| ||| ||||| ||| | |||| |||| || || || |||
Sbjct 2234705 GTCGACCAAGGTGGCAACAAGCGTCCT---GGAGCCTTCGCGATCTACCTCGAACCGTGG 2234761
Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGC 112080
||||| || || | |||||||| || | || ||||| || | ||||| | |||
Sbjct 2234762 CACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGC 2234821
Query 112081 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140
| | || |||||||||| || ||||||||||| |||||||| ||| || | || ||||
Sbjct 2234822 GCT--CGTGATCTCTTCTTTGCGCTCTGGATTCCGGATCTCTTTATGGAGCGTGTCGAGG 2234879
Query 112141 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGG 112200
||| | ||| | ||||| || || | | | || ||||| ||| ||| | | |
Sbjct 2234880 CCGCCGGCGAGTGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTCTATG 2234939
Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGG 112260
| || ||||| ||||| | | || ||||| | || | || || | ||||
Sbjct 2234940 GCGAAGAGTTCCGCGCCCTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGA 2234999
Query 112261 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 112319
| || || || | | | ||| | || |||||| | | || ||| || || | ||
Sbjct 2235000 TCCCCGC-GCAAAAGCTTTGGTACGCGATTCTCGAAGCCCAGGTCGAAACCGGCAACCCG 2235058
Query 112320 TATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 112379
| ||||| ||||| |||||| ||| | || || |||||||| | || ||||
Sbjct 2235059 TTCATGCTCTACAAGGACGCCGCAAACAAGAAATCGAACCAAAAGAACCTTGGCACGATC 2235118
Query 112380 AAGAGTTCCAACCTCTGTACAGAAATC 112406
||| || ||||| || || || |||
Sbjct 2235119 AAGTCCTCGAACCTGTGCACCGAGATC 2235145
>seq73
Length=1807266
Score = 131 bits (144), Expect = 2e-25
Identities = 236/337 (70%), Gaps = 10/337 (3%)
Strand=Plus/Plus
Query 176723 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 176782
|||| || |||||||||||||| || || |||| ||| ||| | ||||||||||||
Sbjct 1175194 TTGATGATCAGACCCTTGATGTGCGATCCATCGTGATCTTGATCGGCCATGATCATGAGC 1175253
Query 176783 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 176842
|| || || ||| | || || || | || ||||| || ||||||||||||
Sbjct 1175254 TTGCCGTAACGGAGCGAGTCGACGTCGGTGTAAACTTTGCCCTGCTGCAGACCCAAGATC 1175313
Query 176843 TTCTTGAGATCG-TTGAACTCTTGGT-TTGATGTGAGCTG-TGTGACAGAGGCATCACGA 176899
| ||||| ||| ||||| ||| || ||| | || | | || | | || |||||
Sbjct 1175314 TGCTTGA--TCGCTTGAA-TCTCGGCATTGTCGAGAAGGGCTTTGCCCGCCGCTTCACGT 1175370
Query 176900 ACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAG 176959
|| || |||| || || | |||||||||||| |||| || ||||| || ||||
Sbjct 1175371 ACGTTGAGCAACTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCGACGACAGCC 1175430
Query 176960 AGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTG 177019
||||||| || || |||| || || ||||| || || |||| |||||| || ||||||
Sbjct 1175431 AGACCCGAGACGGCAAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGCGTGCACTTG 1175490
Query 177020 --CCAGATTGTGCCGTACCCGCCTTGTTCGCATCATC 177054
|| | | | |||||| || || |||||||| ||
Sbjct 1175491 GACCCGTTCCT--CGTACCAGCGTTATTCGCATCTTC 1175525
>seq102
Length=717467
Score = 107 bits (118), Expect = 2e-18
Identities = 264/395 (67%), Gaps = 4/395 (1%)
Strand=Plus/Plus
Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651
|||| |||| |||||||| | || ||| ||| || ||||| ||| | || |||
Sbjct 83564 CCGCTTCTACCAAGCCTCGACCTCCGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAATC 83623
Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 13711
|||| ||| ||||||||||| || ||| ||||| || | ||| | || ||
Sbjct 83624 CGAGACGACGCCCTTCTACCCTCGTTCGCCTTACGGCGTTGCCAAGTTGTACGCCTTCTG 83683
Query 13712 GCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAA 13771
| |||| ||||| ||||||||||| |||| ||| || ||| ||| ||| | |||||
Sbjct 83684 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCTTGTTCAA 83743
Query 13772 CCATGAATCACCGAGACGAGGT-GCAGACTTTGTGACCATGAAGAT-TACCGAGGGTATC 13829
||| || || ||| | || ||| ||| ||| || || | ||| || | ||| | | ||
Sbjct 83744 CCACGAGTCCCCGCGTCGTGGTCGCA-CCTTCGTCACGAGGAAAATCTCGCGA-GCTGTC 83801
Query 13830 AAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGA 13889
| ||| | ||| || |||| | | | | | || ||| | | || || |
Sbjct 83802 GCCGAGATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAACTTGGAGGCCAAGCGT 83861
Query 13890 GATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAA 13949
|| ||||| ||||| ||||| || || | ||||||| | ||||| || |||||
Sbjct 83862 GACTGGGGACACGCACGCGACTACGTGGAGGGTATGTGGATGATGCTGCAGCAAGACACC 83921
Query 13950 GCCGACGAATATGTAGTAGCAACGGGTGAGACCCA 13984
||||||| | ||| | || ||||| || |||||
Sbjct 83922 CCCGACGACTTTGTCCTCGCGACGGGCGAAACCCA 83956
>seq84
Length=1022938
Score = 98.7 bits (108), Expect = 1e-15
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651
|||| |||| || ||||| | || ||| ||| || ||||| ||| | || ||
Sbjct 295748 CCGCTTCTACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTC 295689
Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 13711
|||| ||| ||||||||||| |||||| |||||||||| | || | || ||
Sbjct 295688 CGAGACGACTCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAATTGTACGCCTTCTG 295629
Query 13712 GCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAA 13771
| |||| ||||| ||||||||||| |||| ||| || ||| ||| |||||||||||
Sbjct 295628 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCCTCTTCAA 295569
Query 13772 CCATGAATCACC 13783
||| || || ||
Sbjct 295568 CCACGAGTCCCC 295557
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620741189552320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |