Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq88 149 8e-31 seq73 131 2e-25 seq102 107 2e-18 seq84 98.7 1e-15 >seq88 Length=4649774 Score = 149 bits (164), Expect = 8e-31 Identities = 524/807 (65%), Gaps = 21/807 (3%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||||| ||||| |||| ||||| || | || || || || Sbjct 2234348 CCGCAGCACATGCTCATGCGCGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTC 2234407 Query 111672 TTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 ||| || | ||| || |||||| | | || || | |||||| | || || ||||| Sbjct 2234408 TTGCAGTCGTACAACCTCATGTCCGAGCGCTACTTT-ACCCACGCCTCGCCGACGCTCTT 2234466 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 |||||| || || || || || | || |||||||| | | | ||||| || Sbjct 2234467 CAACGCCGGAACGCCTCACCCGCAGCTTTCGTCCTGTTTCCTGGTCACGATGAAGGACGA 2234526 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 ||| || | ||||| |||| ||| |||| ||||| | || || ||| || || Sbjct 2234527 TTCGATTGAAGGCATCTACGACACGCTCAAGACGTGTGCGCTCATTTCCAAGACCGCCGG 2234586 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGTACA 111908 |||||||| || ||| ||| | || | || | | | ||| || | | ||||| Sbjct 2234587 CGGTATCGGTTTGAGCATTCATAACATCCGCGCGACC--GGCTCCTACATCGCCGGTACG 2234644 Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 || || | || | || || | || ||||| || || | ||| ||| |||||||| Sbjct 2234645 AACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTAC 2234704 Query 111969 GTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022 || |||||| ||| ||||| ||| | |||| |||| || || || ||| Sbjct 2234705 GTCGACCAAGGTGGCAACAAGCGTCCT---GGAGCCTTCGCGATCTACCTCGAACCGTGG 2234761 Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGC 112080 ||||| || || | |||||||| || | || ||||| || | ||||| | ||| Sbjct 2234762 CACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGC 2234821 Query 112081 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140 | | || |||||||||| || ||||||||||| |||||||| ||| || | || |||| Sbjct 2234822 GCT--CGTGATCTCTTCTTTGCGCTCTGGATTCCGGATCTCTTTATGGAGCGTGTCGAGG 2234879 Query 112141 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGG 112200 ||| | ||| | ||||| || || | | | || ||||| ||| ||| | | | Sbjct 2234880 CCGCCGGCGAGTGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTCTATG 2234939 Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGG 112260 | || ||||| ||||| | | || ||||| | || | || || | |||| Sbjct 2234940 GCGAAGAGTTCCGCGCCCTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGA 2234999 Query 112261 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 112319 | || || || | | | ||| | || |||||| | | || ||| || || | || Sbjct 2235000 TCCCCGC-GCAAAAGCTTTGGTACGCGATTCTCGAAGCCCAGGTCGAAACCGGCAACCCG 2235058 Query 112320 TATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 112379 | ||||| ||||| |||||| ||| | || || |||||||| | || |||| Sbjct 2235059 TTCATGCTCTACAAGGACGCCGCAAACAAGAAATCGAACCAAAAGAACCTTGGCACGATC 2235118 Query 112380 AAGAGTTCCAACCTCTGTACAGAAATC 112406 ||| || ||||| || || || ||| Sbjct 2235119 AAGTCCTCGAACCTGTGCACCGAGATC 2235145 >seq73 Length=1807266 Score = 131 bits (144), Expect = 2e-25 Identities = 236/337 (70%), Gaps = 10/337 (3%) Strand=Plus/Plus Query 176723 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 176782 |||| || |||||||||||||| || || |||| ||| ||| | |||||||||||| Sbjct 1175194 TTGATGATCAGACCCTTGATGTGCGATCCATCGTGATCTTGATCGGCCATGATCATGAGC 1175253 Query 176783 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 176842 || || || ||| | || || || | || ||||| || |||||||||||| Sbjct 1175254 TTGCCGTAACGGAGCGAGTCGACGTCGGTGTAAACTTTGCCCTGCTGCAGACCCAAGATC 1175313 Query 176843 TTCTTGAGATCG-TTGAACTCTTGGT-TTGATGTGAGCTG-TGTGACAGAGGCATCACGA 176899 | ||||| ||| ||||| ||| || ||| | || | | || | | || ||||| Sbjct 1175314 TGCTTGA--TCGCTTGAA-TCTCGGCATTGTCGAGAAGGGCTTTGCCCGCCGCTTCACGT 1175370 Query 176900 ACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAG 176959 || || |||| || || | |||||||||||| |||| || ||||| || |||| Sbjct 1175371 ACGTTGAGCAACTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCGACGACAGCC 1175430 Query 176960 AGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTG 177019 ||||||| || || |||| || || ||||| || || |||| |||||| || |||||| Sbjct 1175431 AGACCCGAGACGGCAAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGCGTGCACTTG 1175490 Query 177020 --CCAGATTGTGCCGTACCCGCCTTGTTCGCATCATC 177054 || | | | |||||| || || |||||||| || Sbjct 1175491 GACCCGTTCCT--CGTACCAGCGTTATTCGCATCTTC 1175525 >seq102 Length=717467 Score = 107 bits (118), Expect = 2e-18 Identities = 264/395 (67%), Gaps = 4/395 (1%) Strand=Plus/Plus Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651 |||| |||| |||||||| | || ||| ||| || ||||| ||| | || ||| Sbjct 83564 CCGCTTCTACCAAGCCTCGACCTCCGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAATC 83623 Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 13711 |||| ||| ||||||||||| || ||| ||||| || | ||| | || || Sbjct 83624 CGAGACGACGCCCTTCTACCCTCGTTCGCCTTACGGCGTTGCCAAGTTGTACGCCTTCTG 83683 Query 13712 GCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAA 13771 | |||| ||||| ||||||||||| |||| ||| || ||| ||| ||| | ||||| Sbjct 83684 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCTTGTTCAA 83743 Query 13772 CCATGAATCACCGAGACGAGGT-GCAGACTTTGTGACCATGAAGAT-TACCGAGGGTATC 13829 ||| || || ||| | || ||| ||| ||| || || | ||| || | ||| | | || Sbjct 83744 CCACGAGTCCCCGCGTCGTGGTCGCA-CCTTCGTCACGAGGAAAATCTCGCGA-GCTGTC 83801 Query 13830 AAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGA 13889 | ||| | ||| || |||| | | | | | || ||| | | || || | Sbjct 83802 GCCGAGATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAACTTGGAGGCCAAGCGT 83861 Query 13890 GATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAA 13949 || ||||| ||||| ||||| || || | ||||||| | ||||| || ||||| Sbjct 83862 GACTGGGGACACGCACGCGACTACGTGGAGGGTATGTGGATGATGCTGCAGCAAGACACC 83921 Query 13950 GCCGACGAATATGTAGTAGCAACGGGTGAGACCCA 13984 ||||||| | ||| | || ||||| || ||||| Sbjct 83922 CCCGACGACTTTGTCCTCGCGACGGGCGAAACCCA 83956 >seq84 Length=1022938 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651 |||| |||| || ||||| | || ||| ||| || ||||| ||| | || || Sbjct 295748 CCGCTTCTACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTC 295689 Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 13711 |||| ||| ||||||||||| |||||| |||||||||| | || | || || Sbjct 295688 CGAGACGACTCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAATTGTACGCCTTCTG 295629 Query 13712 GCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAA 13771 | |||| ||||| ||||||||||| |||| ||| || ||| ||| ||||||||||| Sbjct 295628 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCCTCTTCAA 295569 Query 13772 CCATGAATCACC 13783 ||| || || || Sbjct 295568 CCACGAGTCCCC 295557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741189552320